RNA id: XM_043253728.1


Basic Information

Item Value
RNA id XM_043253728.1
length 456
RNA type mRNA
GC content 0.57
exon number 2
gene id insl3
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 11414306 ~ 11414845 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATGAACGTGAAGTGGTTTGCATCTTTAGCTTTTTTAGTTCTTCTCGAGACTCCCAAGACTGAGGGTCAAGATGTACGTGTGAAGCTTTGCGGTCGTGAGTTCATTCGGATGGTGGTCACCTCATGTGGAAGCTCTCGACTCAGACGAAACGCACCCGGTTCAGACCTTCACTTCGCAAACCCGCACAGGAATCTACAAAACTGGCTCGACAGAGAGGCGCACCAGAGAGGAACCCTGACTGCTGAGGACGATCAGTGGAGGGAGCGTGACTCCCCTGAGAGCGGGACAGAGCGTCCGGCCCCCCATCAGCACACAAGCCCACCAGCAGAGCTTCTGGGACGCTCCAGCACCGCGCAGGATCTCAGCATGTCCTCCAGGTCCCGCCGTGATGTGGGGCCAGCGGGCGTCTGCTGTACTTCAGGATGCACCATGAGCGAACTGATTCAATACTGCTGA

Function

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU16707 lncRNA downstream 74709 11335731 ~ 11339597 (-) False trnau1apb
TU16732 lncRNA upstream 7825 11422670 ~ 11423431 (-) True G11263
XR_006247844.1 lncRNA upstream 25157 11440002 ~ 11440899 (-) True LOC122328878
TU16757 lncRNA upstream 32973 11447818 ~ 11448594 (-) False crsp7
TU16760 lncRNA upstream 39413 11454258 ~ 11455403 (-) True G11280
TU16761 lncRNA upstream 41481 11456326 ~ 11456854 (-) True G11281
XM_043264370.1 mRNA downstream 8626 11379243 ~ 11405680 (-) False kcnn1a
XM_043264350.1 mRNA downstream 8627 11379243 ~ 11405679 (-) True kcnn1a
XM_043264379.1 mRNA downstream 8636 11379243 ~ 11405670 (-) False kcnn1a
XM_043264360.1 mRNA downstream 8638 11379243 ~ 11405668 (-) False kcnn1a
XM_043262679.1 mRNA downstream 36427 11367570 ~ 11377879 (-) True zgc:154006
XM_043222048.1 mRNA upstream 3097 11417942 ~ 11420734 (-) True si:rp71-39b20.4
XM_043220314.1 mRNA upstream 26145 11440990 ~ 11445110 (-) True cnn2
XM_043223724.1 mRNA upstream 32244 11447089 ~ 11453203 (-) True crsp7
XM_043262689.1 mRNA upstream 43606 11458451 ~ 11467496 (-) True crtc1a
XM_043262700.1 mRNA upstream 60776 11475621 ~ 11476171 (-) True LOC122361755
XR_006253162.1 other downstream 8606 11382106 ~ 11405700 (-) False kcnn1a
XR_006253161.1 other downstream 8609 11382106 ~ 11405697 (-) False kcnn1a
TU16716 other downstream 74709 11335731 ~ 11339597 (-) False trnau1apb
TU16480 other downstream 552752 10767974 ~ 10861554 (-) False LOC122359216
TU16500 other downstream 611018 10800716 ~ 10803288 (-) True G11105
TU16731 other upstream 27573 11442418 ~ 11445113 (-) False cnn2
TU16759 other upstream 33913 11448758 ~ 11449423 (-) False crsp7
TU16758 other upstream 34690 11449535 ~ 11452920 (-) False crsp7
TU16802 other upstream 161546 11576391 ~ 11577516 (-) True G11317
TU17467 other upstream 2139007 13553852 ~ 13558004 (-) False LOC122328470

Expression Profile