Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043253859.1 |
| length | 1415 |
| RNA type | mRNA |
| GC content | 0.36 |
| exon number | 6 |
| gene id | ube2wa |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056700.1 |
| NCBI id | CM032069.1 |
| chromosome length | 25613461 |
| location | 14146033 ~ 14149244 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | biological_process |
| GO:0006513 | protein monoubiquitination | biological_process |
| GO:0006515 | protein quality control for misfolded or incompletely synthesized proteins | biological_process |
| GO:0071218 | cellular response to misfolded protein | biological_process |
| GO:0006281 | DNA repair | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004842 | ubiquitin-protein transferase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU17696 | lncRNA | downstream | 4176 | 14139482 ~ 14141857 (-) | True | G11940 |
| TU17716 | lncRNA | downstream | 41050 | 14101518 ~ 14104983 (-) | True | G11958 |
| XR_006252496.1 | lncRNA | downstream | 115768 | 14016345 ~ 14030265 (-) | True | LOC122357571 |
| TU17484 | lncRNA | downstream | 353156 | 13748940 ~ 13792877 (-) | True | G11794 |
| TU17480 | lncRNA | downstream | 444722 | 13694319 ~ 13701311 (-) | True | G11792 |
| TU17726 | lncRNA | upstream | 40357 | 14189196 ~ 14189598 (-) | True | G11966 |
| XR_006252500.1 | lncRNA | upstream | 41637 | 14190476 ~ 14191109 (-) | True | LOC122357595 |
| TU17729 | lncRNA | upstream | 44736 | 14193575 ~ 14193812 (-) | True | G11969 |
| TU17756 | lncRNA | upstream | 100164 | 14249003 ~ 14250540 (-) | True | G11982 |
| TU17808 | lncRNA | upstream | 280072 | 14428911 ~ 14430054 (-) | True | G12024 |
| XM_043216924.1 | mRNA | downstream | 6710 | 14136231 ~ 14139323 (-) | True | rpl7 |
| XM_043219783.1 | mRNA | downstream | 32298 | 14105263 ~ 14113735 (-) | True | trpa1a |
| XM_043256432.1 | mRNA | downstream | 62569 | 14077992 ~ 14083464 (-) | True | shhb |
| XM_043224065.1 | mRNA | downstream | 94400 | 14042928 ~ 14051633 (-) | True | cnpy1 |
| XM_043220931.1 | mRNA | downstream | 138136 | 13994788 ~ 14007897 (-) | True | paxip1 |
| XM_043255130.1 | mRNA | upstream | 1331 | 14150170 ~ 14151983 (-) | True | elocb |
| XM_043255082.1 | mRNA | upstream | 9495 | 14158334 ~ 14179577 (-) | True | jph1b |
| XM_043255074.1 | mRNA | upstream | 14022 | 14162861 ~ 14179577 (-) | False | jph1b |
| XM_043255066.1 | mRNA | upstream | 14022 | 14162861 ~ 14179577 (-) | False | jph1b |
| XM_043255056.1 | mRNA | upstream | 14022 | 14162861 ~ 14179577 (-) | False | jph1b |
| XR_006247862.1 | other | downstream | 7884 | 14138060 ~ 14138149 (-) | True | LOC122328947 |
| TU17473 | other | downstream | 581704 | 13560329 ~ 13564329 (-) | False | LOC122328470 |
| TU17474 | other | downstream | 582731 | 13560329 ~ 13563302 (-) | False | LOC122328470 |
| TU17472 | other | downstream | 585768 | 13559222 ~ 13560265 (-) | False | LOC122328470 |
| TU17470 | other | downstream | 591414 | 13553852 ~ 13554619 (-) | False | LOC122328470 |
| TU17840 | other | upstream | 430156 | 14578995 ~ 14610266 (-) | True | adcyap1b |
| unassigned_transcript_207 | other | upstream | 724237 | 14873076 ~ 14874382 (-) | True | LOC122360578 |
| XR_006247132.1 | other | upstream | 973686 | 15122525 ~ 15127491 (-) | False | faim2a |
| XR_006247859.1 | other | upstream | 981760 | 15130599 ~ 15130715 (-) | True | LOC122328941 |
| TU18236 | other | upstream | 998365 | 15147204 ~ 15151772 (-) | False | smarcd3a |
