RNA id: XM_043254489.1


Basic Information

Item Value
RNA id XM_043254489.1
length 2443
RNA type mRNA
GC content 0.45
exon number 22
gene id kif2c
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 15754575 ~ 15761754 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTGAATGCAGAGCGGTTAATGTTGGTTTACGACTCATAGGGACAAAGTAGAAGAAAAATACTACTCTCAGTTTTGAGATAGAAACGTTGGCAAAAAATCTTGCAGTTTACAGACTATAATCTGAGATGGATCCTGCGTTGTCGAAGCTTCTTATCGGGCTCGCTGTCAATATAATTCGTAGTGATGGAAGGATCCACAGTGCCACTGTGAAAACTGTCAATGTCACTAAAGGTACAGTGAATGTGGAATGGTCTGAGAAGGACATCACGAAAGGAAAAGAGGTCGACATGGATGAGCTTAAGCAACTCAATTCTGACCTTATGCAACACGTTCAACCAAGCCGTCAAGAGGATTCTGAGTCCTCCCCTGGCCATTTCGCCGCACCTGTGTCAAAACCAGCAAAAAACGTCAGAGCATCAGTGCTTCCTTTAAGGTCGTCAAGAATACCTACTACTTCAGAACCTGCTCCTCTACATTGTTCTTCTGAAGAGCCAGCTTCTAGAAGGATGACCACACGTCAGACTTGCTTGTTCCGTCAGCCTGCCCCTCCACCTGTGGTCTCGGCAGTAGCTGCAGAGGAAGTTCTCTCTCACAATCTTCCATCATCTACAATCCCCAAAGCTTCAGGTTACCAGAAGAGACTTGTTTCGAAGCCAGCTTCTCCTCTGCTGCCAACTATTGAGGCTATTTGTGAGAGTGAAGCTTCCAAATGTGCCCCCATGGGCCCAACAAGCCATCGCATGTCTCAGGTCTCAGAAACAAACAAGATGGCAAACAAACGGTTGTCGCTAGCAAAAAATcctgaagcacaaaaaaaaggaaagTTTGGAGATGCAAGTCGACCTAATAAGCAGTTTTACCAGATGATTGAGGAATACAGAGAGACCCTGGAGAAAGTACCCATGTCCTTGTCTGATCCTGTCAAACCTCACCGAATATGTGTCTGTGTTCGTAAACGTCCGCTGAATAAAAAAGaGTTGGCGAAGAAAGAGATTGATGTGGTAACAATTCCTGGTAATGGAACCCTACTGTTGCATGAGCCCAAGCAGAAAGTGGATCTAACCAAGTACCTAGAGAATCAGACCTTCCATTTTGATTACTCATTTGATGAAGACGCCACTAATGACTTGGTTTACAGGTTCACGGCTAAACCTTTGGTTAAGACCATTTTCGAAGGTGGTATGGCAACGTGTTTCGCATATGGCCAAACAGGCAGTGGAAAGACCCATACTATGGGTGGAGACTTTTCTGGGAAGagccaaaacagctctaaagGGATTTACGCCCTGGCAGCACAGGATGTATTTACCCTCCTAAGGCAAAAGAGATATGCCGATATGGACCTTTGCccttatgtaactttttttgagATCTACAATGGCAAGGTGTTTGACTTGCTGAATAAGAAAGCAAAGCTGCGTGTTTTGGAGGATGAAAAGCAGCAGGTCAATGTTGTTGGCCTGCAGGAAGTGCCGGTGTCATCGGTTGATGATGTCATCAGGATGATTGAGAGGGGAAGTGCGTGcagAACGTCTGGACAAACATTTGCCAATGCCAGCTCGTCTCGTTCACATGCGGTTTTGCAAGTGATTCTAAGGCGTCGGAATTTCCTCCATGGGAAGTTCTCTCTGGTGGACCTTGCTGGGAATGAGCGTGGCACTGATGTCAGCAGTAACGATCGGCACACCATAGTGGAGACCGCAGAGATCAACCGCAGCCTGCTGGCTTTGAAGGAATGTATCCGGTCTCTGGGTCAGAACAGCGAGCACATCCCGTTCAGGATGAGCAAACTCACCCAGGTGCTTCGGGATTCCTTCATTGGAGAGAACTCTAGGACCTGTATGATCGCAATGATCTCGCCGGGTATGAACTCTTGTGAATACACTCTGAATACACTACGTTATGCAAACAGGGTAAAAGAACTGAATGGATTGTCTAAGGGAGCTTCAGCGGAGAATGGTGCACAACTAGAGCTTTCTGAGGAAGGAAACTCTTCAGAAGAGgagtcTGTTCTCCCAGCATTTGAGGCTATATCCCAAGTGTCTGAGATGGAGGAGAGGTTTTATGAAGAACTGAAGGGTTGCAGTGAGTTTGCAAGATCTATGGAATTTCCCTCGTTTGATATTGTAGCCAATTTACCAGAGATCGACACATTCATGAGGAAACTGCAAGAGTCTTACCAGGCTTTGAGATCGGCTATTGAAGCAGAACAGAGGGTCAGGATGTCACCCAACTAATCTAAGATGAGATTCAGCTGCGAACAACCGCAAAGAAACCTCTTACAAAAGCTAATGCAATTTCaatttgttcttttaataatCTTATCTCCTATCTGGCTAGAGATATAtcaagtgtttgtttgtgtctgtttttttttgtgtctgttttaattgtttttgtttactgaataaagGTTCCCTCATCTTGAATCTTTTGTAAATCA

Function

GO:

id name namespace
GO:0007018 microtubule-based movement biological_process
GO:0005871 kinesin complex cellular_component
GO:0005874 microtubule cellular_component
GO:0005524 ATP binding molecular_function
GO:0003777 microtubule motor activity molecular_function
GO:0008017 microtubule binding molecular_function

KEGG:

id description
K10393 KIF2_24, MCAK; kinesin family member 2/24

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006252280.1 lncRNA upstream 11777 15731830 ~ 15742798 (+) True LOC122356092
TU18415 lncRNA upstream 12974 15731819 ~ 15741601 (+) False LOC122356092
TU18398 lncRNA upstream 76129 15676203 ~ 15678446 (+) True G12419
XR_006252526.1 lncRNA upstream 254261 15498524 ~ 15500314 (+) True LOC122357737
TU18270 lncRNA upstream 501531 15252494 ~ 15253044 (+) True G12321
TU18436 lncRNA downstream 49139 15810893 ~ 15811393 (+) True G12451
TU18465 lncRNA downstream 113430 15875184 ~ 15875750 (+) False dars2
TU18466 lncRNA downstream 113430 15875184 ~ 15875708 (+) False dars2
TU18481 lncRNA downstream 116380 15878134 ~ 15878404 (+) True G12491
XR_006252739.1 lncRNA downstream 271003 16032757 ~ 16034626 (+) False LOC122359940
XM_043254165.1 mRNA upstream 49004 15694208 ~ 15705571 (+) True kiss1ra
XM_043218409.1 mRNA upstream 169402 15580143 ~ 15585173 (+) True zgc:113531
XM_043259962.1 mRNA upstream 190245 15521579 ~ 15564330 (+) False slc6a9
XM_043217539.1 mRNA downstream 87330 15849084 ~ 15856755 (+) True klhl20
XM_043217526.1 mRNA downstream 98425 15860179 ~ 15875764 (+) True dars2
XM_043260157.1 mRNA downstream 270229 16031983 ~ 16224471 (+) False astn1
XM_043260150.1 mRNA downstream 270230 16031984 ~ 16224471 (+) True astn1
XM_043260163.1 mRNA downstream 270230 16031984 ~ 16224471 (+) False astn1
XR_006252462.1 other upstream 971598 14776322 ~ 14782977 (+) False ackr4a
XR_006252465.1 other upstream 971871 14776322 ~ 14782704 (+) False ackr4a
TU17566 other upstream 1574960 14175364 ~ 14179615 (+) True G11854
TU17573 other upstream 1574960 14175364 ~ 14179615 (+) False G11854
TU17265 other upstream 2881430 12867983 ~ 12873145 (+) False rnf152
TU18526 other downstream 505289 16267043 ~ 16268797 (+) True G12531
TU18915 other downstream 1270565 17032319 ~ 17037297 (+) False golim4b
XR_006252905.1 other downstream 1600491 17362245 ~ 17367861 (+) False sppl2
TU19352 other downstream 1805087 17566841 ~ 17567916 (+) True G13114
TU19349 other downstream 1845498 17607252 ~ 17608092 (+) True G13111

Expression Profile