RNA id: XM_043256031.1


Basic Information

Item Value
RNA id XM_043256031.1
length 1720
RNA type mRNA
GC content 0.42
exon number 15
gene id c2h10orf67
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 13911856 ~ 13928370 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCGAAATCTGCAGTCAAACGTTGTGCGAAAGCGTTTATGTCCTATAGGTCGGATTCATGGACGTTATCGAAAAGAGAATAGACAGCATTGCGGATGAAACCGAGGAGGAGCTCATTTCGGAAGAGATTAAGGAAATACGTCGATACGCTCTGTCAAACCAGCTGAGGGCAGGGTTTTTCGGACAAGACGCCTGTGTCCAAACTGACGAGTCAGAGCTGCCAAAAATAAAGACACTCTCTGCCAGCACCGCAGAGCTTGTGAAGGAAATGAACACGTTAAAAGAAGACATTGAGAAGAAATTGAAAGTAATACGTTTGCAGTATGAGACCAAACTGCAGGACGAATCTGACGCCCTTTATGCAAGTATTAATGATAAAATCAAGAATTTGGAGAACTGCCAAAAGGAGaaattatctGTTCTTCGGAGAAGCTATCAGCAGCAGCTCTCAGACGCTATTCAGGTGATCAAAGCCAGCTATAAGaatgaagaaGAGACGGATGTGGTTTGTGATGTTACTGATGGAAGAGTAAAGGACCTTCTGAATGAGCTTCAGGAGAAGAACTTGAAGATTGAGCAGATGGTTGAACAGCTAAAGAAATATGAGATCGGCTCAGAGGGAGCGGAGGACCCAGAGAAAAGCAGACTGAAGTCAGAGAATGAAAAGCTAAAAGATAACATTGACTCGCTGCATGTCGAGCTGGAGGAAATTCACAGAGTCCTGGAATCCAAAGAGCAGAGGCTGGCTCTGGATTTGGCACAGTTAAAATCAGAAGCTGACGACAGCAAAAAAGCCCTTCAAAAGaTGACAGGTGAACACGAGCAACTGAAAGTGCAGTTGAACCTTGAAAGAGAAAGTGGCAGAGAAAAGATAAAACAGCTAAAAGAGGAAATAGAGAAAGAACTTTCATGCATTGAAGCCTCACGCATGAAGGATAAAGCCGTCACTGaaaagaagaagcagaagaCAGCAGAAACTACAACCATGGAGCTTCCTGGGGATGCAGAGTCagctcaaaaaataaaagaactcAAAAAGACTGAAGCAATGCAGAAAAAGGAGATTGAAagGCTCAGTAAGCAGTTGTACATGTCCAATCAGGCGTGGGAAAAGAAGTTTGAGATTTTAAGACAGAGGTACATCACAACTCtaggttgcttttttttttttatcgactCCATGAGCTGTTCTACattgacattttctttcttaagTTTCCATGCCATCAAGGATGAGATGTTCTTGCGGCAGACATTGCAGCGGCAGGAAGCCATTCTGCACAACGCCTCAGTCAGCTTTGCGATGAATGCTCCTTGCTCACCACGGCAGAAGAGTCCAGCAGACAGGCTGGGCTATACTGCTCCTTTGCCACGTATAGGTGCTGCAGGCCAGCAGAAGATGGACATCGGTCTACAGAGTGATAGAGGAGCAGATGCTTCTCCTGGATTAGATCCCAAGTTGAGCGTGGCAGATGAGGAAGACGAAGAAGTATAAACTGGAGTTTTTTCCCGCATTTCAACATGGTTTTTGaagttcaaatttaaaatagagATGGCTTAGTCAGTGCACAGGTTGTTGATGATGGTATGAAACTTATaaacttacattttataaatcaaataatattgCAGAGTTGAGGAGGTCAAAGAGATgtattaagaatatatatatatatatatatatatatatatatatatatatatatatatatatatattttt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU17484 lncRNA downstream 118979 13748940 ~ 13792877 (-) True G11794
TU17480 lncRNA downstream 210545 13694319 ~ 13701311 (-) True G11792
TU17440 lncRNA downstream 439459 13471698 ~ 13472397 (-) True G11770
TU17421 lncRNA downstream 441593 13315229 ~ 13470263 (-) False LOC122323969
XR_006252496.1 lncRNA upstream 87975 14016345 ~ 14030265 (-) True LOC122357571
TU17716 lncRNA upstream 173148 14101518 ~ 14104983 (-) True G11958
TU17696 lncRNA upstream 211112 14139482 ~ 14141857 (-) True G11940
TU17726 lncRNA upstream 260826 14189196 ~ 14189598 (-) True G11966
XR_006252500.1 lncRNA upstream 262106 14190476 ~ 14191109 (-) True LOC122357595
XM_043222219.1 mRNA downstream 195577 13566182 ~ 13716279 (-) True LOC122327014
XM_043224176.1 mRNA downstream 347491 13553773 ~ 13564365 (-) True LOC122328470
XM_043222218.1 mRNA downstream 359307 13535103 ~ 13552549 (-) True LOC122327000
XM_043218110.1 mRNA downstream 441593 13464566 ~ 13470263 (-) False LOC122323969
XM_043220795.1 mRNA downstream 935441 12948439 ~ 12976415 (-) True cdh6
XM_043220931.1 mRNA upstream 66418 13994788 ~ 14007897 (-) True paxip1
XM_043224065.1 mRNA upstream 114558 14042928 ~ 14051633 (-) True cnpy1
XM_043256432.1 mRNA upstream 149622 14077992 ~ 14083464 (-) True shhb
XM_043219783.1 mRNA upstream 176893 14105263 ~ 14113735 (-) True trpa1a
XM_043216924.1 mRNA upstream 207861 14136231 ~ 14139323 (-) True rpl7
TU17473 other downstream 347527 13560329 ~ 13564329 (-) False LOC122328470
TU17474 other downstream 348554 13560329 ~ 13563302 (-) False LOC122328470
TU17472 other downstream 351591 13559222 ~ 13560265 (-) False LOC122328470
TU17467 other downstream 353852 13553852 ~ 13558004 (-) False LOC122328470
XR_006247862.1 other upstream 209690 14138060 ~ 14138149 (-) True LOC122328947
TU17840 other upstream 650625 14578995 ~ 14610266 (-) True adcyap1b
unassigned_transcript_207 other upstream 944706 14873076 ~ 14874382 (-) True LOC122360578
XR_006247132.1 other upstream 1194155 15122525 ~ 15127491 (-) False faim2a
XR_006247859.1 other upstream 1202229 15130599 ~ 15130715 (-) True LOC122328941

Expression Profile