RNA id: XR_006252402.1


Basic Information

Item Value
RNA id XR_006252402.1
length 2147
RNA type transcript
GC content 0.50
exon number 8
gene id olfm3b
representative False

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 9162611 ~ 9171915 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTCTCCACACATCTCTCAAACTTTTCTGCGCCCGGAGCGACGATGACAGCGCACGCACTTTCAGCGGCTCCATCGAGGATATCCGATCCCAAGATACTGACAAGGAGCTCGATCTGAAAGCTCGGAGAGAGAGAAGCGGGTTGCAAGAGAGACGTAGGCGGGAGACTGGAGGCAGAATGCGGGCGCTGATCGTGGTGCTGAAACCGCTGTGTTTTCTCGCTCTGCTCGGCTACTGCCCTTCCGCGACCATCAGACCAAAGGAGGGCTGGCAGGTGTACAGTTCAGCGCAGGATGCCGACGGCCGCTGCATCTGTACAGTGGTGGCACCAGAACAGAACCTGTGCTCCAGAGACGCAAAGAGCAGACAGCTCCGCCAGCTACTGGAGAAGATTCAGAACATGTCGCAATCAATCGAAGTGCTGAACCTGAGGACCCAGAGGGACTTCCAGTATGTCATGAAAATGGAGAGCCAGATGAAAGGACTCCGATCAAAGTTCAGACAAATCGAGTCGAACCGAAGAACATTATTGACTAAAAACTTTCAGGAGCTGAAGGGGAAGATGAACGAACTGCAGCCGCTGATTCCAGTGCTGGAGCAGTACAAGACTGACGCCACGCTCATATCTCAGTTCAAGGAGGAGATCAGGAACCTGTCTCTGGTGCTGATTGCTATCCAGGAGGAGATAGGAGCGTACGATTACGAGGAGCTCCAGCAAAGGGTCTTCGGCTTGGAGGGAAGACTGAGGAACTGTATGAACAAACTCACGTGTGGTAAGTTGATGAAAATCACGGGCCCCATCACTGTAAAGACATCAGGAACGAGGTTTGGAGCTTGGATGACAGACCCTCAGGCTTCACCTAAGAACAACAAGGTCTGGTACATGGACAGCTATACAAACAACAAGATCGTCCGTGAGTACAAATCGGTAAGCGACTTTGTGTCTGGCGTGGAGTCAAGAACCTACAACCTTCCGTTCAGCTGGGCCGGAACTAATCATGTGGTCTACAACGGCTCCCTTTACTACAACAAATACCGGAGCAACATCATTGTCAGGTACAGCTTTGAAAGCGGCCGGGTTATGACCCAACGAGCTCTCGAGTCCGCCGGCTTCCACAACGTCTACCCATACAGCTGGGGCGGATTCTCAGACATTGACCTGATGGCCGACGAGCTCGGTTTGTGGGCCATCTATGCCACCAATCAGAATGCAGGGAATGTAGTGATCAGCCAGCTGGACCCTCTGACCATCCAGGTGCTGAACTCTTGGAACACAGAGTACTCCAAACGAAACGCGGGTGAGTCCTTCATGATCTGCGGCACACTGTACATCACCAACTCCCACATGACCGGTGCTAAGGTATACTTCTCATACTCCACCAAAACCTCTACCTACGAGTACATGGACATCCCCATCCACAACCAGTACTTTCACATGTCCATGCTGGATTACAACGCCAGGGATCGTGCACTTTACGGCTGGAACAATGGCCACCAGGTACTGTTCAACGTCACGCTGTTCCACATTATTAAAACCGACGACGAATCCTGAGGGATCTACCCTGAGGAACATTCGCGCATCTTGTTTGACTTCTCATCTTCAGTGACGAGTGACAGCTCTAGTCTGACGAATGCAATTTCACTTCAGTCAACACATCTCTCCAGGCCCCTGATTCACGCAGGCAGCCAGAGATGCGGACtttgaagaagaaaatgaagggggaaagagagagagagccaaaAAAGAGAGGCGCAGTGAGCAAAGCTGAGTAAATGGACTTAAGTTCCTGCGTGCGAGCAGCAGGCCTGTGGGTGTTGCAGGCGTATGAGGTTGAGTCAGCTCTCAGGTGGACTGTCAGAGTGATTGGGTCTGAATGCATTAGACGTGGTGAAATGAGAAAGATGCCGTGTCACATTGCTCAGAATATGCATCTATTAGCTTTCAGATGCATATGAACTGCGAAAAACTGTGTCAGTGGCTGTGCGCAGCCATTTGTTATGTTATCCTTTGGTTGAAGACGCGCgcgcatatatgtatgtatatgtatgtattatatatttattgctgTTAGCAAGATATAGAGATTAACACTACCATTAACATATATAATTctatttggtcccactttatattaagtggccttgaCTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU15557 lncRNA upstream 104752 9057090 ~ 9057859 (+) True G10446
TU15556 lncRNA upstream 106366 9055723 ~ 9056245 (+) True G10445
TU15541 lncRNA upstream 221425 8939969 ~ 8941186 (+) True G10433
TU15539 lncRNA upstream 232538 8929504 ~ 8930073 (+) True G10431
TU15463 lncRNA upstream 282158 8879942 ~ 8880453 (+) True G10374
TU15580 lncRNA downstream 43590 9215505 ~ 9216664 (+) True G10466
TU15704 lncRNA downstream 282451 9454366 ~ 9454745 (+) True G10557
TU15718 lncRNA downstream 314262 9486177 ~ 9572793 (+) True G10571
TU15720 lncRNA downstream 314262 9486177 ~ 9510133 (+) False G10571
TU15733 lncRNA downstream 405256 9577171 ~ 9577406 (+) True G10581
XM_043224154.1 mRNA upstream 8177 9087694 ~ 9154434 (+) True col11a1b
XM_043217443.1 mRNA upstream 233301 8890773 ~ 8929310 (+) True vav3b
XM_043259092.1 mRNA upstream 284511 8851116 ~ 8878100 (+) False LOC122359011
XM_043259139.1 mRNA upstream 285409 8848327 ~ 8877202 (+) False LOC122359011
XM_043259083.1 mRNA upstream 285409 8851112 ~ 8877202 (+) False LOC122359011
XM_043254902.1 mRNA downstream 1938 9173853 ~ 9180307 (+) False tecrl2b
XM_043254892.1 mRNA downstream 3270 9175185 ~ 9180307 (+) False tecrl2b
XM_043254885.1 mRNA downstream 3295 9175210 ~ 9180307 (+) True tecrl2b
XM_043221226.1 mRNA downstream 67717 9239632 ~ 9248291 (+) True abcd3b
XM_043223752.1 mRNA downstream 83470 9255385 ~ 9277476 (+) False si:dkey-10f21.4
TU15202 other upstream 1054834 8106865 ~ 8107777 (+) True G10212
TU15034 other upstream 1580226 7505591 ~ 7582385 (+) False G10108
TU14783 other upstream 2175492 6986298 ~ 6987119 (+) True G9925
TU14736 other upstream 2470236 6691668 ~ 6692375 (+) True G9889
TU14734 other upstream 2471832 6690372 ~ 6690779 (+) True G9887
TU15832 other downstream 574679 9746594 ~ 9751212 (+) True arpc5a
XR_006247735.1 other downstream 739713 9911628 ~ 9916861 (+) True znf414
XR_006247736.1 other downstream 739713 9911628 ~ 9915491 (+) False znf414
TU16308 other downstream 1539215 10711130 ~ 10718194 (+) True G10979
TU16555 other downstream 2068211 11240126 ~ 11256764 (+) False kcnh2a

Expression Profile