RNA id: XM_043258792.1


Basic Information

Item Value
RNA id XM_043258792.1
length 1352
RNA type mRNA
GC content 0.43
exon number 8
gene id cryz
representative False

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 7084134 ~ 7098176 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTAAAATAGTAGTTTGTTTGCTAGATTTGCTGTGCCGCATAGGCTAACTCATGTTTGGTATTCGGTCGGGTACGGTGGCCGGGATGGGTCCAAATTCATGTCTTACGGAAGTGAAGAACTGTGACAGCTGAACAAGTTGTTTTGCAGAGGCTACTATGGCCACATCTAAATTCATGAGAGCCATTAGGGTGTCAGAATTTGGAGCCCCTTCCGTTTTAAAACTCTGCACAGACGTACCTGTGCCAAATCCTGGTCTGAAGCAGGTTCTGATTCGAGTCCATGCATGTGGCATAAACCCAGTGGAGACATACATTCGCTCTGGATCCTATGCTCGAAAACCCAGCTTGCCCTATACTCCAGGATCAGATATTTCTGGTGTGGTTGAAGCTGTTGGGGATGGTGTTTGCCTTCTACGGACAGGTGACAGAGTCTTCACCACAGGCACAGTAACGGGAGGATACTCTGAGTTTGCTGTGGCCTCAGAGGACACTGTTCACAAGCTTCCTGATTCCCTAGACTACAAACAGGGTGCAGCTATTGGAGTCCCATATTTTACTGCATACCGGGCGTTAGTTCAAAAGGCTCATGCCAAAGCTGGTGAGGCAGTTCTTATCCATGGAGCCAGTGGTGGGAATGCTACCAGTGGGCAAGGCGTGAATGTAATCATTGAGATGTTGTCCAACATCAACCTCAGTAATGATCTTCAGTTGCTCGACCATGGCGGCAGAGTAATTATCGTTGGTTCTAGAGGCCCTATTGAAATCAACCCCAGAGACACCATGATGAAAGAGACCAGCATCATTGGTGTGGCTTTATACAATGCAACTAATAATGAAACATCAGAGTGTGCCGCAGCTCTTTTTGCAGGAATGGAGACAGGATGGTTGAAACCTGTCACTGGTCCTGAATATACACTTGATAAAGCATCCCAGGCTCATGAAGACATAATCAACAGCCCTGGAGCCAGTGGAAAGATGATTTTGATTATCTGAAATTATGCAGGAAATCCAATGCAAAATAACTAAACTGTCATTGCATTAAATGGAgtgtcttattttgtgttcaaagaagaaagaaactcatacaggtttggaataaaaGCCTCACATTGTTCCAaccctgtatgaatttctttctttgctgAACACAAATGGGCATGgtttgaagaatgtgggtaaccaaacagttgatgcTAGCCATGCTAAAAAAAACGATGGAAGTCAGTGATTACCATCAACTGTTTTTTGCTGAATACAGCTACATGCTATTTTCATGTATGAATCGCAGATATGAAACGCATAATAGAGACCTGTTTTttggaaatgaaattaaataaacagtttaatcTTCAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU14808 lncRNA upstream 33140 7050725 ~ 7050994 (+) True G9940
XR_006247410.1 lncRNA upstream 41046 7042831 ~ 7043088 (+) True LOC122325829
TU14802 lncRNA upstream 47636 7036121 ~ 7036498 (+) False LOC122324999
XR_006247246.1 lncRNA upstream 47674 7036056 ~ 7036460 (+) True LOC122324999
TU14792 lncRNA upstream 73540 7009360 ~ 7010594 (+) True G9930
TU14819 lncRNA downstream 1452 7099628 ~ 7100661 (+) False lrrc53
TU14902 lncRNA downstream 91479 7189655 ~ 7196400 (+) True G10012
TU14903 lncRNA downstream 98914 7197090 ~ 7199537 (+) True G10013
TU14910 lncRNA downstream 108331 7206507 ~ 7209934 (+) True G10020
TU14911 lncRNA downstream 112562 7210738 ~ 7210938 (+) True G10021
XM_043256234.1 mRNA upstream 110963 6970493 ~ 6973171 (+) False penka
XM_043256227.1 mRNA upstream 110963 6970494 ~ 6973171 (+) True penka
XM_043260288.1 mRNA upstream 204485 6856254 ~ 6879649 (+) False bpnt2
XM_043258735.1 mRNA downstream 127 7098303 ~ 7105792 (+) True lrrc53
XM_043258743.1 mRNA downstream 2006 7100182 ~ 7105792 (+) False lrrc53
XM_043258755.1 mRNA downstream 8035 7106211 ~ 7111272 (+) True fam151a
XM_043262341.1 mRNA downstream 28095 7126271 ~ 7151771 (+) True ssbp3a
XM_043262347.1 mRNA downstream 28095 7126271 ~ 7151771 (+) False ssbp3a
TU14783 other upstream 97015 6986298 ~ 6987119 (+) True G9925
TU14736 other upstream 391759 6691668 ~ 6692375 (+) True G9889
TU14734 other upstream 393355 6690372 ~ 6690779 (+) True G9887
TU14569 other upstream 716180 6367177 ~ 6367954 (+) True sst2
unassigned_transcript_205 other upstream 861615 6222445 ~ 6222519 (+) True trnag-gcc_21
TU15034 other downstream 407415 7505591 ~ 7582385 (+) False G10108
TU15202 other downstream 1008689 8106865 ~ 8107777 (+) True G10212
XR_006252402.1 other downstream 2064435 9162611 ~ 9171915 (+) False olfm3b
TU15832 other downstream 2648418 9746594 ~ 9751212 (+) True arpc5a
XR_006247735.1 other downstream 2813452 9911628 ~ 9916861 (+) True znf414

Expression Profile