RNA id: XM_043259560.1


Basic Information

Item Value
RNA id XM_043259560.1
length 4612
RNA type mRNA
GC content 0.45
exon number 11
gene id pip4k2ab
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 10592212 ~ 10610735 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GAGGCAGCGAAGCCTGATCCAGCTGCTGCATACAGGCGCAGTGGATGGGCTCAGATGCCCGCTCTCCGTCGGGGCTTCACTCCAGCAGTCGTCTCCTTTTAGCGTTTCgctcgttttctttttttgcgcTCGCCGCTGACAGATCCGCAAACGGTCGTGCCACGATAACGCGCGTCGTCGGGGTCTCGCGGTGATTTTAAACGAGGCGACACACCTTTTTATAGCGGGGTGCTGCAAAATCTCCGCGCTCCGAATCTGTGCGCTTGTTTACTCCTCGTAACGTTTCGCGACGAGCACCGGACGCCCTTCGTTTGAGCCTCTGGGATGCTTTGCCGGCCGGGTTTAAGGTTTAGTTTGCGTGAATGAGTTGGTAGCGCACACGTCCAGCCAACTGTAACCTTCAAGCTAACGTCAATGACAGCTAGCAGTTAGCTGGTGGGGGAGTTTGGTGGATAGCGGGGTTTCTGagagtttttttccccccgtcgCTCGTCAGCTGCGCGTTTGCAGAGGGATGCGTGAACGCGATGCATTAAATAACGAAAGGGACAAATCGCGTGTGGAGATCCGGCGGGGCGCTGCTGATTCCGAACAGCTCGTGTCGAGGCATCGCCGTAGAGAGGGATTTCATTCATCCGAGCCTGCTCGCTAAACATGGCCTCTGCAGCCAGCAGCCTTGCTGCATCCATCGCCAGCAAAACCAAAACCAAGAAGAAACATTTCGTGTCTCAGAAGGTGAAGCTGTTTCGGGCCAGCGACCCGCTGCTCAGCGTCTTGATGTGGGGAGTGAACCACTCGataaaTGAACTCAGCCACATCCAGATTCCTGTTATGCTGATGCCTGATGACTTCAAAGCCAACTCAAAGATCAAGGTGGACAACCACCTCTTCAACAAAGAGAACATGCCAAGCCATTTCAAGTTTAAGGAGTACTGTCCTCTAGTCTTCCGCAATCTGAGGGAACGGTTCTCCATTGATGATCAGGAATATCAGAACTCTCTGACACGCAGGGCCCCAATTCCCAGTGACGCTCAGGGCCGTAGTGGAGCTCGTTTTCACACTTCGTACAACAAGAGGTATGTCATCAAGATCATCACCAGCGAGGACGTGGCCGAGATGcacaacattttgaaaaagtaccACCAGTATATAGTCGAGTGCCATGGAAACACGCTGCTCCCTCAGTTTCTGGGCATGTATCGCCTCACAGTGGATGGAGATGAGACCTACATGATCGTAACTCGTAATGTCTTCAGCCACCGGCTGcctgtttacaaaaaatatgacCTGAAGgGATCCACAGTGGCAAGAGAGGCTAGCGACAAAGAAAAGCCACGTCCACCCGAGGAGGCTCCGTCCAAATCACGCATGAGCCAAAAGCTACAAACCATCCGGATTGCCACACGCTTTTACTGCGCCATAAGACACACCAAGGAGCTTCCCACTTACAAAGACAACGACTTCATCAACGACGGCCAGAAAATCTGCGTCGACGAGGAGAACAAGAAGATGTTCCTGGAGAAACTGAAGAATGACGTAGAGTTCCTGGCCCAGCTGAAGCTGATGGACTACAGTCTTCTGGTGGGGATCCATGATGTGGAGCGAGGGGAGCAGGAACAGCCCGAGGAGGAGAGCGAAGACAACGACGCTGGAGAGGAGGAGGGGACGGAGAGCGACGGAGGGGCCACCGGCTCCCCGCCGGACAGCCCCAGTAACACACTAGACAGCAATAGACCTCTGGGCCCGGGAGAGTTTGATCCCACCATTGATGTGTATGCCATCAAGAGCCATGAAAATGCTCCCAAAAAAGAGATCTACTTCATGGCAGTGATTGACATTCTCACTCCATATGATGCCAAGAAGAAAGCAGCCCACGCAGCCAAGACAGTCAAACATGGGGCAGGGGCCGAGATCTCAACGGTCAACCCCGAGCAATATTCAAAGCGGTTTTATGATTTCATCACCACCATCCTCTCCTAAGGGCTGCCCCGAGGCTGGCGCGAGGAAGAGTAACAGGTGGCCGCACACGAGCTCATATCCTGAGAGAGGTTTTGCTGTGGGTAACGGAtccagtgtctctctctctctctctctctttctctctctcacttgtcACAGGATCACGTCTGAGATCTGtcaagatctttttttttttcgtttacaGTTTGTTTCGTTTTTCTCCTCTGTTGGATTTTTCGGTAGGTTTATGGCTCCACGTGGTTGATAAGGCATACATGTGATATAGTCATGCATATATAGCGTTCTGTACCTTTGTGTTAGATATTGTTGATTGAGAAACCGAGTGATGTTGTTTGTGCCCAGCTCCGTGGTATGATTATCATACTGGAATTCTCAAAGctgcttatatatttattgtctttaCGTTCTCTGCGGAGCAAAAGTCATTGTTCTCAGAGGAATGGTTGACCTGAAAATTGGACTTTGCTGAAGACGTACTCGCCCTGAAGATGTAAccaagtttgtttcttcacatGAAACGATTTGAAACGTAGCATCGCGTCAGCGGCTCACcggtgcagtgaatgggtgccgtcagagcaagagctgataaaataattataatactcCCAAGTAATCCAGCTGATCGATTCATGTTTTGTGaagcaatgtttttaataaattaatcgAAGCATTTTTAACTTTGTGCAGATTATGTTATTATGTTGGCACCCATTGACTGCAGAGGATCggttggtgagcaagtgatgcaatgctagtTTTAAAGACGAAACGAACTCATCTACATCCTAGATGACCCCAGAGTACGTTTTcatcaaattacttttttattttttttttattttgaagtgaacTAAAACTTACTtgactaaaaaaaaagcctccGGTTTTAAATCGCaactaaaaaaatcatttcgatttctgaaataaatttaGCCCTGAACAAATACGACTAGAGtcagaataaatacaaattggaATAAATAGTCGGAAAGTGTTTATTGCACTATCGCTCTTTAGCTGCAGGCGGTACCTTTAAATCGAATCTGTTTACGAAGCGTTTGTGACGTTACGAAAAGAATGCAACTTCAGGATCGATTACAGCGTTTATAGTTAAGATCCGATCAGTAAATTGGATTTAGATGACCTGCCTGTCGTGCATTGTAAAGTCTTGCACAGGAGCTCAATATTTGCAATTGGCTCCGGTAATAACGTTTAGTATGACTCAACTGTTTTTTGCACATGATGTAACGCACCAAAACGTTTATGCAAATGATTCCAGTTTTACCACTGACTCGCGGAGGGTCATGCAATAGTAGTGATTGGTAGAATGTGTTAAGCACCTAATGGGTTACATGTGCGTTGCCACTTTTGTATCCCTAGTGAAGGAACAAAACATTGcctgttttatgttgtttagcTCTTGATTAGAGAACATTGTATGAAGACGAAGCGTATTTTGTACCTccctttttttacagtaatactTAGCAAGTTTACAGTGGGCTGTTCTCTTGAGAATGCAGTTGTGCTGGCGCTATATAGATGCTTGAATCTGCGTATAGTGTTTCAGCTGCACTGTAAAGAGCGAGGGAACGCTGCCCCTTACTGTtgatatctctctctctctctctctctctctctctctcatcattGTCGAAACTTTGTGTGATCCCAGAGACCTttagtattataaaaatatatagatattgtgATACGTCTTCTTCTGAAATTTCGTTTGCAAAAGTAATCCTAaatattctactgtatgtgttGACATATATACACTGTGCGAGGGTGTGCCTTTTTTActctgaattatttaattttgtatttgaatcatttttttaaaaagagacgttcgaaaaatgttattttctaaaAAGGGAAAAGGCGAATAAGGACGAATCCTAAGGTGGTTTTGCTGTTCCTGTGTAGATGTGTAAATATGCAAGTGTATTACGTGTACGCAATATTACGACAATGTTGCAGTCCTCACGGTACAAAAGCAGTAACAGTTTTCCTGAAATTATTACCCTGATCGATTTGCTTACTAATTCGATTCCTACATCGTTGTCATAACTGAAGTAGTTTTGGTTGACGTTTTTTAAGGCTCGATTGTGTTGTTGTATTTTGATTTCCGTGCTATCACTTGCTAATTGGATAATGAGAAATGTAAGCTCTTTGTTTTTAGGACGGTTTCCGGTGGAAGAGGCGAGAGGCTTCGTGAACACACAACTCTCGACGTCTGTACAGCACATGtgaatctcaaaaaaaaagacacttctGTGAGCTTTTGGGGGGGCGGGGAAATGACTTCGCTTTGTCTCAGATTGCATAGAGTTACGATCCCATGTgttgtaatttgtaaaaaaaaaacgacaaaaaaaaaaacacgcttcCATGTTGATAGTGCTGTGCGGGGTTTGATGGAAAAAAGCGTTGAAGGACGTGCGATCCCTGAATATACAGTCAAAGGAAGATATTATCAGTTGTCGGTCTACTTGTCATAACTGTTATCTATGTCATGAAAGTGTGCagctcttgtgtgtgtgtgctgtaggcctaaaatatttaaaagcactCTGTCCCGTAAGCATTGCTCAATAAAACGATGCATTGCTCCGCTTGA

Function

GO:

id name namespace
GO:0046488 phosphatidylinositol metabolic process biological_process
GO:0016307 phosphatidylinositol phosphate kinase activity molecular_function

KEGG:

id description
K00889 PIP5K; 1-phosphatidylinositol-4-phosphate 5-kinase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU16351 lncRNA downstream 199050 10392696 ~ 10393162 (-) False fbxl7
TU16322 lncRNA downstream 271847 10318984 ~ 10320365 (-) False ca8
TU16318 lncRNA downstream 365356 10226218 ~ 10226856 (-) True G10987
TU16144 lncRNA downstream 432148 10158578 ~ 10160064 (-) True G10869
TU16114 lncRNA downstream 496510 10095217 ~ 10095702 (-) False hfm1
TU16411 lncRNA upstream 55746 10666477 ~ 10666712 (-) True G11057
TU16424 lncRNA upstream 56911 10667642 ~ 10668053 (-) False G11064
TU16425 lncRNA upstream 57083 10667814 ~ 10668967 (-) True G11064
TU16426 lncRNA upstream 57083 10667814 ~ 10668124 (-) False G11064
TU16423 lncRNA upstream 58331 10669062 ~ 10669414 (-) True G11063
XM_043259477.1 mRNA downstream 11590 10575252 ~ 10580622 (-) True dnajc1
XM_043259639.1 mRNA downstream 18309 10570812 ~ 10573903 (-) True si:dkey-29d8.3
XM_043259577.1 mRNA downstream 27739 10543107 ~ 10564473 (-) True vipr1a
XM_043259318.1 mRNA downstream 50837 10535136 ~ 10541375 (-) True zbtb47a
XM_043259660.1 mRNA downstream 71245 10507323 ~ 10520967 (-) True ctdsplb
XM_043259378.1 mRNA upstream 5570 10616301 ~ 10624744 (-) False riok1
XM_043259368.1 mRNA upstream 5570 10616301 ~ 10624708 (-) True riok1
XM_043259387.1 mRNA upstream 5570 10616301 ~ 10624698 (-) False riok1
XM_043259267.1 mRNA upstream 14341 10625072 ~ 10655849 (-) True rreb1b
XM_043259675.1 mRNA upstream 53557 10664288 ~ 10665070 (-) True LOC122359387
unassigned_transcript_206 other downstream 202589 10389551 ~ 10389623 (-) True trnak-cuu_1
TU16347 other downstream 214001 10376063 ~ 10378211 (-) True G11011
TU16135 other downstream 448544 10142043 ~ 10143668 (-) False lmo4
XR_006253077.1 other downstream 452627 10121767 ~ 10139585 (-) False pkn2a
TU15736 other downstream 1072690 9500139 ~ 9519522 (-) False plppr5a
TU16485 other upstream 147297 10758028 ~ 10764891 (-) True G11102
TU16480 other upstream 157243 10767974 ~ 10861554 (-) False LOC122359216
TU16478 other upstream 158784 10769515 ~ 10783951 (-) False LOC122359216
TU16500 other upstream 189985 10800716 ~ 10803288 (-) True G11105
TU16716 other upstream 725000 11335731 ~ 11339597 (-) False trnau1apb

Expression Profile