RNA id: XM_043263784.1



Basic Information


Item Value
RNA id XM_043263784.1
length 8126
RNA type mRNA
GC content 0.46
exon number 19
gene id zfyve9a
representative False

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 8403327 ~ 8427904 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AGACGCCATCTTGGCTCAAGCGAAAGTCGCTAGCGTGGGAATCTCACGCCGCTTCAGCGTAGCTTGAGCCAAAATGTCCCACCCTTGCTGCAGTTCGTAGTAACCTTCTCCATTAAACCTTTGGGGGAGGGATATACGAGAGCTGTCGCACAAACTACTTCTTCCTCCACTTCTGTGGAACACTGGAAAATGGCCTAGCTGTTCCTGGAGGTATCCTGCAGATGTCAAAAACAGTACCGCTTGCTTATATGACACGAAGTATGTTGGATTTTTCCCGCGGAGTTTCATGGCTGAATCGTGcgtgaagatgatgatgatgatgatgatgatgatgttgggGATTCCACCGATTTGGCTGTCAAATGTTTGTGAAACTGGATGAGACAAGGGCTCTGTCAAGAGCCTTTGTGCAGATATACCTGCAATTACTGAAGAGGACCTCTGAGCAGGTTCACAAGGAACTTGGCAGGGTGGAGTTTCTTGACCCATGGAGAATTACTTTCAGGCTGAGGCCTTTAACTTGGACAAGGTGCTGGACGAGTTTGAACAGAACGAAGATGAAACGGACACGCCGACTCTCTCGGATGCCAAGTGGACCCAGATTCTCGCTCCGCCATCACACCTCCTTTCCCTGAATCCAGCACTGACCCACTCCGACCTCAGCCCAAGGGACAGTCCTATCAGCTTCAAGCCGCTTCTAGATGCCCAGACGTCAGATGGGTCCTCTTTGGCTGAGGTCACCAGGTTAGATGGGAAACAGGGGGTGGGGCAGCAGCCAGAGGGCTGGAGTGAAGAACGGCCAGCAGATGTTCACAGTCCTCCTCTGCCCCAGCCTAACATTGGCAAGCTGGTGAGCACTGATGGGCAGTTGGCAGACTTGTCGTCCTCCAACAGAGTGGTGCTGGAAAACGGTTATCCATCTAGTCCTGATTTTAGCAATCGGACAGACATTCTTCCGGTCAAAGAAGATGAGACGTGTCAAAATGTTATAGAAGTGCAAAGTATTAAGGACACTGGTCCCCGAGAGTTTAAGAGGGAGCAGAATGGTACTGACAAGGGAAGTGGTAGTGGTCTTCAAGATTTTACCGTTATTGAGGAAGAGTGTGGGAATGGGCCACCAGTTTTGAATAATGCTGTTAAGATGGAGGCAAGGCAGTCTGACAATGGTTCGTCTGTACGTGAGGTCGGAATGAGAGACTGTAATCTGGCATTTCCAGAAGGAAGTAATCCCCAGAAAGCAGAAGCAGTTTTGCACAAATCGGTGAATGGTGACGGAGAACTGGATTGCGAGAGGGAGAATCATGAGGGTGCCTTTCAAAATGGTGGACTGGTTGAGAAGGAAAGTGCAGTGAAAGAAACCTGGGCGTCAaaacaggaagagaaagagaaaatgataGAGAGTGACCGTGAGGGAATGCACAGAGAGTCTGAATCATCGGGGACGGAGATATCCATGTCCAATGGTCTGATTGTGGATCATGGTGAAGATGCACAAAGCCAGTCAGCAGCCCCTTCAAAGGAGGACTCTGTGACGGAGGAAAAAGAAATGGAGGAAAGCAAACAAGAGTCTTGTGATTCAGTTCGAGGACTGGAATCTGGCAGAATAAGCAAACTCAACAACAGCCGGCTACAGCCTGTCAGCGTTCCCTATGGTGGTGCCCGCCCAAAACAGCCTGTCAGTCTGAAGCTGCAGATTCCCCAGCCTTTCTCAAGCCAAGTCCAGAATGAATTTGGCTCCACTGGCAAGAACAAGAATCTGGAGCCACAGAGTAGGACAGGAGGCCTTGAGGCGTCTTGTGGAACAGCGGAGACTGATGTTGTTCGAATGAATGGAGAGCATGGAGATAGCTCGTCAGGCTTACTCATCCCTTCTGAGAGTCCAGACAATGACCTCCAGGCAGGACAGCAAATCAAGAAACCCTTCAACTCTTTGGGGGAAGTGGCTCCTGTTTGGGTTCCTGACTCCCAAGCACCCATTTGCATGAAGTGCGAGGTCAAGTTCACCTTTACTAAAAGAAGACATCATTGTCGTGCTTGTGGCAAGGTGTTCTGTGCTGCTTGTTGTAGTCTGAAAAGCAGGTTGATGTACATGGATAGAAAAGAAGCCAGGGTATGTGTTACCTGCCACCGTGCACTTATGAATGCTCAAGCATGGGAGAACATGGGAGGAGGTTGCAACCAGAGCCCAAATCCCAACAACCCAGCTGAGTACTGCTCTACTATTCCTCCTCTCCAACAAGCCCAGGCATCGGGAGCGCTCAGCTCCCCACCTCCGACCGTTATGGTGCCTGTTGGTGTCCTAAAACAACCAGGATCTGAAGGCTCTGTTCCTCGAGAGCAAAGAAGGGTTTGGTTTGCTGACGGCATTTTACCCAATGGGGAAGCTACAGACTCATCTAAAGGGCCGGCGGCAAACCCCAACCCCACACAGCCTGTGGCAGCATCCCAGTACTCAAACAAATCCTCAGGAGCCAATGCTTCTGAGGCGGCCCGTGCCACCGGAGCACCGACGGCCAGCCCTGTGGGCAGCTCTCTCAGTCTGATCCCAGAGGACGGACTTCCTCCCATCCTCATCTCCACGGGCGTCAAAGGAGACTATGCTGTTGAGGAGAGACCTTCTGAGATTGTGCTGATGCAGCAGCTTGAGGAGGGCGGTCCTGATCCCCTGGTGTTTGTCCTCAACGCCAACCTGCTGGCCATGGTCAAACTGGTTAATTatgtAAATAGGAAATGCTGGTATATGACAACAAAGGGTATGCATGCCGTGGGCCAGGCAGAGGTTGTAGTGCTTCTACAGTGCCTCCCTGACGAGAAAACCATTCCCAAGGATGTTTTCAGCCACTTCGTCCAGCTGTACCGGGAGGCTCTCACAGGAAATGTGTTAAGCCACCTGGGCCACTCCTTCTTCACTCAGAGCTTCCTGGGCAGCAAGGAGCATGGCGGCTTCCTTTACATTAGCCCCACCTTCCAGACCCTGCAGGACCTGCCGTTGCCTAACCCACCCTACCTCTTTGGCATTTTGGTGCAGAAGTGGGAGACCCCCTTGGCCAAGGTCTTTCCCATTCGGCTCATGCTCCGCCTAGGGGCGGAATACAGATTTTACCCCTGCCCACTATTTAGCGTTCGCTTCAGAAAACCCCTCTTTGGAGAAACTGGTCATACCATTATGAACTTATTGGCAGATTTCCGTAACTACCAATACACCTTGCCGGTGGTGAAGGGGCTGGTGGTGGACATGGAAGTGAGGAAGACTTCCATCAAGATACCGAGCAACCGCTACAATGAGctcatgAAGGCTATGAATAAGTCCAATGAGCACGTGCTGGCAATGGGAGCATGCTTCAACGAGCGGGCGGATTCCCATCTTGTGTGCGTTCAGAACGACGATGGAAACTACCAGACGCAAGCCATCAGTATTCATCACCAGCCTCGCAAAGTGACCGGGGCCTCCTTCTTTGTGTTCAGCGGAGCTTTAAAGTCTTCATCGGGCTACTTGGCTAAAACCAGCATAGTGGAAGATGGTGTGATGGTGCAGATTACAGCTGAAACGATGGAGGCCTTACGGCAAGCCCTGAGAGAGATGAAAGATTTCAGTATTGCCTGTGGGAAAGCTGATCAGGAGGAGAACCAGGAGCACGTCCATATCCAGTGGGTTGATGACGACCACAACGTCAACAAGGGTGTGATCAGCCCCATTGATGGAAAATCCATGGAGTCAGTCACCAGCGTTAAGATCTTTCATGGCTCGGAGTATAAAGCCAATGGCAAAGTCATCCGTTGGACAGAGGTGTTTTTCCTGCGGTGCGAGGACCAGACCAATGGCCTGAGTGATCCTGCGGACCACAGCCGGCTCGCTGAGAACGTGGCAAGGGCTTTCTGCATGGCCCTGTGCCCTCACCTTAAACTTCTCAAAGAGGACGGCATGGCCAAACTGGGCTTACGAGTCACGCTGGACTCGGATCAGGTGGGCTACTTAGCAGGCAGTAACGGTCAGCCGCTGCTCCCCCAGTACCTGAGCGATCTGGACAGCGCCCTCATCCCAGTGATCCACAGCGGGGCCTGCCAGCTGAGTGAAGGGCCCGTGGTGATGGAGCTCATCTTTTACATCCTGGAGATCATCTCCTAAAACGAGGGAATCCGTCCAGTCTCAGACTCATGCCTCCCACCAGCTCGAGTCCCTcttcgctctctttctctctcatttgcaCTTCAAAGAGCCTGAAAGCTGTGCAGGAACAAGTCCTCCATACCACCTATGCACCATCTCCACTGGGCCGCCCTCTGCCCAGCCCTGCTGAATGTGGTGCTCTTTCGTTTCTCCTCACCTCTCAACTCCACTGTGGAAACCATAGGCCCTGTTGAGTCAAAAGGGGTGGTGACCCTGAATTCGATCTCTTCAGAACCGTCGTAGCAACACTAAGCTCCTCAAACACAAGAGGGCGCTCTGCACGCTCAGTCCTAATGGAGATGACCGACAAAAGGGAAGGCGCGCACCATGAAACGGTTTCTGGTACATAGTGCCTGGGCCTCTATTAGAAACGAAGAAAGAGCTTCAGTCTCGCCTCTAAGCTTTATGAATCACCAGATGCTTTATTTCATGTACATGGACCTCGTTTTGCTGAAAATGCTCCAAAGCTAAAATGATGTAGCTTCCTCAGAGCCGGGCTGCTTGGCATGTTAGCGGAAAGATATATGGAACAGTATTAGGAACGTTGACGATTGAGTGACTGTCGCAAATGTCAAGAATGGACCTCTGTTAtagactttattattattattacaagaCAATAAGACCCAATAATAATTTCAAGCGGCCTTCAGGAATTCAGCTACAACATCAAGATCCACGTAATGGTAGGTTTTGACATGACTGGAGGCCTCAGTCCAGTAAAGCTTTTATATTAGATTTGTTTAGACCGGGATAGAGGATGAAATGTCATAGTTTCTCTGGGCCACTGCGTTTATTATCTCATCCTATCCCATCTTTTCTCTCAACGTTTTAGTGGCCCATGTTTATATAATGTTCTGCCAGTGTTTTTAACACGTTCTCATATAATGGATTGTGTAAGGAATAGCAATGCAGTGCACGGGATATTAAGCCATCGTTAGGAAATAGAAGGAGGGAATAAAGAATGGGTTTGCTAATATTTActaatctttttctttctttttttttttttttttaaagatgaatgttATATTCGTAGATGAGGAAAGGTTGGATTTTTGTATTTGGTTCCAAAGCCTTTAAAGGCCCCGATATACTTGATTGAAaacaaaggtttatttattgtatccGTTTAAATCGGCTTtgaaagaagaacaaaaacgaTAGCAGCAGTgtggtgtaatatttatttgcctgCTACCTTTCCTTTCGTTCTTTTTCGTGGCTTTGGAAATCTTGtatttcagtgttgtttttttgcacaacTCCGGGTTGTTGACACGAGCTTCTGTTGTAATTTCTTTTGTAGGCATTAATTGCTTAACGTTTAACTTTTTATATCGACTTGGAGATGTTGCTCCATCCGTCTTAAAGAAGAGTTTCAGAACACACCCACCGCTTGCGTAACCGCCTCAGACCAATGGTAGCTCAAAGGTGTTTGGGAGTTTGGTTAGCTTTGGTGAGCCGATTCAAACTGCCACAACGAACTCAAAACGAACTTCGTTTTGGCCTGATTTTGTTCGAAATGACGTCATTTCGGTTCATTCTTCGATTTCATTTGAAGTATATCGGGGCCTTAATTCACCTGTCAGTTTGAGGTCTTTAATGCCATGAGCTTCTCATAGtgttaaagggacagctcacccccaaaaaaacagtTCTGTCACTGCTTCATATCGTTACCCGCCCTCATGTCGTACTGAACCTGTgcgaccttcgttcatcttctgaacactaattaagatgttttggatgAATTCAGAGAGCTGACTCTCCCATAGACGGCAAGGATCATCCTTACATGATCATAGCTCAAAAACGCGTTTCAGATGGAACGGCATTTAATACACCGAGCCGTAGTTCACTGGCAGGCTAAAATAAGCTTacaataatccatgtgacatcaggggttcaaccataattttataaagctatgagaatattttttgcgcgaataatgactttatttaacaatttgtcTCTTCTCCATCACCCTGTACTGGCATTTTGGAGAGTTTCAAAAACGTAACGTATGCATGCAGAAACAAGTTCTTAACAAAGTGACATATGTAATGTATGCAAgattctccaaaatggtgctataGGGAAGAGACGAATTATTGTTGAATAAAGACATGGATTATTTCAACGATGACCTTGCTACGTTTCTGAACTCTTGGAATTCATTACaaatgtcttcattttattgacagaattttcattttgagtgaGGTACGGTTACGTTAGTGAAATTTTGGGCTAAAAGGTTCATTGTCTGCTGTCAGTAGTGTTGGATGTGTGAAGCACAGCTCGCATAGAAAGCACTTTGAAAGCAAGCAACTTCATGTTGGTCGACGCAGGTTCTGCGTCACACAGGATTCATGATTGCACGGATTGcttttttgcctttaaaattTACTGAAGAACTGTAACTGTGACCATACCTTCACGTGTTTTATATCCTTTtatagatataataatataccGTTATAAATATGCTTTAGCAGGGCCTCAGACTGCTTCTGGAATAGCTGCAAATGccacaaaatacaaatttgaggcaaaaattaataacattgtCAGGAAATGTCCACTAATGATTTTATACGAAACCCTTTAATGTACATGcaaaatttttttctttttaattacacttCAATGATGGGTTTTTGACGCGCGTCGGATTTTGTTCCAGCATGATAAATCAGATTCAGTCACTGAAATATTCAGAGCCATTACACTTTTCGCAAAACGCACTGAACTGCTATGACTTGCTATGTTTATTGGttcagtcattttaaagtgCGTTTCGcttctaaaatagtttttaacaaaACGTGTTTGTTAGTCCGGAGCCCTGCTTCAGATTCCCTAATTCAGGTTGATGCATCTTGTCCTTAAGATAAGTTCATAAGCAGGATATTATTTGAATCATCTTTTTGTATCGATGACTAACTATAGTTAGCCAGCTCACTTAGGAACTCTCCCAAAACTGTAAACTACCAATACAAGGAGCTTTTGTAATTCAGGATGTCGCTGTTGATCACATTTAAGAGAAAATGGCATTTGCCTTAAATTCCTAAAATGATATGTTTATCAAGACATATTTCAAAGGTCTAGATTGTCGATCGCATCTAAACTCGTAGAAAGACACTGTGACTGCGGAGTGTTTTTAACCAGCCCTCTTTTAACTAGCTAAATAAGTGTTATTAAAATGGCTTCACGTGAAGTATCTTGACTATGACAATCAAATTATAGTTAATCTTTAGTCCGATAGCAAAGCGAAGGTGGGATGGTAACATATTGTCCTATTTTGCATAATGACAGATACGGTTGGTTTCATCAGATGGCCTACGCTTGATGAATGAGGACAGCGGCTGATATGAAGATCCACAGCAAGTGAACCTCACAGGCCTTTATTAACAGGTCAACAGTTGAGCCGTTTCTGGCTTTCGGTGAAGAGCGCCGCCAGCTTTGCAAGCAGACtgttcatgaaaaataaatggcattaCGCGAAGGCTGCATTGTCTTCCCACTAACACAGCTCAAAACAGCCTTTTGTTACTCCCCGTATCCACctttgtcattgtttttctAGACGTGCGGTATTGTATATCTgcacatttctatattttgttaACCATAGGCTTTTccatgtaatttttatttcttttttctggcCGGCCCAAAGTGTGATGCAGCATGCATGCTGAAAAATCAAGAGAACGTGTAGTTCTCAGAAAATCTTTGCATTTCGTCAGCATTTCAGAGGACGATCTGCTCGAAAGAACAGTTTTACATACTATTGATTTGATCTGTGATGAAATGCTGTTAAAACCTGACATGGGTGGAATGGGAATAAATTTGCAATGTatgaaaaccaaaaagaaaaggaaaaaaaaaaatacaaccttTCTTTATTGTACACtacaaatgtcaataaaaagtCTTTATCAAA

Function


GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU15173 lncRNA downstream 332974 8070154 ~ 8070353 (-) True G10194
TU15162 lncRNA downstream 468702 7934401 ~ 7934625 (-) True G10185
XR_006247832.1 lncRNA downstream 611717 7788737 ~ 7791610 (-) True LOC122328801
TU15121 lncRNA downstream 871262 7526339 ~ 7532065 (-) True G10165
TU14934 lncRNA downstream 1179726 7211173 ~ 7223601 (-) False dipk1aa
TU15417 lncRNA upstream 202503 8630406 ~ 8630606 (-) True G10345
TU15482 lncRNA upstream 326946 8754849 ~ 8755145 (-) True G10389
TU15494 lncRNA upstream 370679 8798582 ~ 8798986 (-) True G10400
TU15540 lncRNA upstream 501587 8929490 ~ 8930083 (-) True G10432
TU15546 lncRNA upstream 515196 8943099 ~ 8943593 (-) True G10438
XM_043263826.1 mRNA downstream 17069 8382987 ~ 8386258 (-) True cdc20
XM_043262386.1 mRNA downstream 37040 8357731 ~ 8366287 (-) True kncn
XM_043255196.1 mRNA downstream 50081 8348639 ~ 8353246 (-) True tmem275a
XM_043221864.1 mRNA downstream 138751 8208651 ~ 8264576 (-) False pbx1a
XM_043254540.1 mRNA upstream 2644 8430547 ~ 8436282 (-) True thpo
XM_043254549.1 mRNA upstream 2644 8430547 ~ 8436280 (-) False thpo
XM_043216866.1 mRNA upstream 59207 8487110 ~ 8496645 (-) True fam131a
XM_043218623.1 mRNA upstream 71362 8499265 ~ 8519579 (-) False eif4g1a
XM_043218610.1 mRNA upstream 71362 8499265 ~ 8519579 (-) True eif4g1a
TU15203 other downstream 295539 8106856 ~ 8107788 (-) True G10213
TU15175 other downstream 331493 8070776 ~ 8071834 (-) True G10196
TU15155 other downstream 618173 7784468 ~ 7785154 (-) True G10178
TU15133 other downstream 909483 7492206 ~ 7493844 (-) True G10170
XR_006252317.1 other downstream 1390954 7009912 ~ 7012373 (-) False lhx8a
TU15605 other upstream 759585 9187488 ~ 9188109 (-) False abca4b
TU15736 other upstream 1072236 9500139 ~ 9519522 (-) False plppr5a
XR_006253077.1 other upstream 1693864 10121767 ~ 10139585 (-) False pkn2a
TU16135 other upstream 1714140 10142043 ~ 10143668 (-) False lmo4
TU16347 other upstream 1948160 10376063 ~ 10378211 (-) True G11011

Expression Profile