RNA id: XM_043263841.1


Basic Information

Item Value
RNA id XM_043263841.1
length 1635
RNA type mRNA
GC content 0.44
exon number 8
gene id elovl1a
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 8373238 ~ 8382443 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTAGAATGAGCTGCTGCTCAGGTTTATATTGGGCTGGGAGCACGGCCTGTCACTGCCTTGGCAAAACTCCCACTGGAATACATTCCTCCTTACTCTATCACTCAGTTCACTGGTGAAAAGTGCTGCGCTTGAGGGCCACTGAAAGAAAGGATAAGGACACCAAAGTTCAGAGACTGTTTCCACTGCTTCCCTGGGTCTCTCATCCGTTTACTTGCCCCTGTGGGGcagtattattttcatttgttttttatttatttatttatttttagcttggGTGACTGAATCAACGGAAAGACAACAGTTTATTGGttgtctgaagaaaaaaagacaagatgTTTCAAGAGGTGCTTTCAAACATCTGGAAGTTCTACGACTATCTCCTGAAAAGAACTGATGCCAGGGTGCGGGATTATCCGTTGATGCAGAGTCCCATTCAGATGACATTCATCTTGCTGGGATACGTGATCTTCGTCTTATATGTGGGACCACGATACATGGCCAATCGTAAACCTTTCCACCTCAACACAGCTATGATTGTCTATAATTTCTCAATGGTGGCCTTCAACGCCTACATTGTTTATGAGTTCCTGATGTCTGGCTGGGGAACAACGTACACTTGGAGATGCGACCTCTGTGACCCCTCCAACAGTCCTGAAGCTCTTAGAATGGTTCGGGCAGCCTGGTTGTTCTACTTTTCCAAATATATTGAACTTCTAGATACGGTGTTTTTTGTGTTGAGAAAGAAGCACAGTCAGGTGACGTTCCTGCATATCTTTCATCATTCTGTCTTACCCTGGACCTGGTGGTGGGGCATCACTCTTACTCCCGCGGGTGGCATGGGATCTTTTCATGCTATGGTGAACGCATGTGTCCATGTCATCATGTACACCTACTATGGTCTGGCAGCTGCAGGGCCCAGCTTCCAGAAGTATCTGTGGTGGAAAAAGTACATGACAGCGATCCAACTGgTTCAGTTTGTGCTGGTGACTGTCCATATCTCTCAGTATTACATCATGGAAAAGTGTGAATACCAAGTTCCCATCTTCATTCATCTCATCTTGATCTATGGCACTTTTTTCTTCATCCTGTTCTCCAACTTCTGGATCCAGGCCTACATAAAGGGAAAGCGACTGCCTGTTTCCACTAAGGACAAACCCAAACAGAACGGCATAACCACTGTGAATGAGCCAGTGGTAGTCGCCAATGGCAAACACTTGGAAAACGGCACTGCGCACTACACTAATGGACTTGCCCACAACGGGAAAGTGAAGGAGGTCTAAATGGGCCAATCAGAAATATCAGAGACATTTTTGTTAGAAtatttgtcaaattaaatttttttttacgattgCATGGGAGATGAAACGGCACATTGGATCTGGCGGTGGGCCCCCCTTTCTTAGTATTTATAGATGTTGGAGGCTGGGGAGCACTGTGCATGAAGAGAATTCGTCCACTGAAGTCGTTGACGTCACTCTGAAACCTGACATCATGTCTGTGGTTTAATCCGCTTGACCTTGGCTTTTTTCCTGGCATATGAGTCTCCCAGTTGTTTGCACACTGTACAGTTTAACTGTAAGTCTAACTCACACttgactgtaaataaatgttttctcacggtttattagaaatgta

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU15209 lncRNA upstream 114462 8219265 ~ 8262830 (+) True G10219
TU15180 lncRNA upstream 286756 8081817 ~ 8090536 (+) False G10198
TU15220 lncRNA downstream 139959 8522402 ~ 8528707 (+) False G10226
TU15223 lncRNA downstream 139959 8522402 ~ 8528707 (+) False G10226
TU15224 lncRNA downstream 139959 8522402 ~ 8528707 (+) False G10226
TU15228 lncRNA downstream 139959 8522402 ~ 8528707 (+) True G10226
TU15298 lncRNA downstream 177655 8560098 ~ 8561513 (+) True G10271
XM_043218822.1 mRNA upstream 58825 8315131 ~ 8318467 (+) True glula
XM_043256906.1 mRNA upstream 986257 7388418 ~ 7391035 (+) True ptger4c
XM_043256194.1 mRNA upstream 1030637 7340271 ~ 7346655 (+) False dmbx1a
XM_043256186.1 mRNA upstream 1030637 7340271 ~ 7346655 (+) True dmbx1a
XM_043216746.1 mRNA upstream 1077191 7297986 ~ 7300101 (+) False gng12a
XM_043263798.1 mRNA downstream 4434 8386877 ~ 8403214 (+) True cc2d1b
XM_043263812.1 mRNA downstream 4434 8386877 ~ 8403214 (+) False cc2d1b
XM_043263803.1 mRNA downstream 4434 8386877 ~ 8403214 (+) False cc2d1b
XM_043216826.1 mRNA downstream 57436 8439879 ~ 8486904 (+) True clcn2a
XM_043216804.1 mRNA downstream 60734 8443177 ~ 8486904 (+) False clcn2a
TU15202 other upstream 269515 8106865 ~ 8107777 (+) True G10212
TU15034 other upstream 794907 7505591 ~ 7582385 (+) False G10108
TU14783 other upstream 1390173 6986298 ~ 6987119 (+) True G9925
TU14736 other upstream 1684917 6691668 ~ 6692375 (+) True G9889
TU14734 other upstream 1686513 6690372 ~ 6690779 (+) True G9887
XR_006252402.1 other downstream 780168 9162611 ~ 9171915 (+) False olfm3b
TU15832 other downstream 1364151 9746594 ~ 9751212 (+) True arpc5a
XR_006247735.1 other downstream 1529185 9911628 ~ 9916861 (+) True znf414
XR_006247736.1 other downstream 1529185 9911628 ~ 9915491 (+) False znf414
TU16308 other downstream 2328687 10711130 ~ 10718194 (+) True G10979

Expression Profile