RNA id: XM_043264804.1


Basic Information

Item Value
RNA id XM_043264804.1
length 5130
RNA type mRNA
GC content 0.43
exon number 14
gene id adcyap1r1a
representative False

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 24998780 ~ 25026174 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGAAAGACAAGGAAATGCATTGATGCATATTGGTGAAAATTGACTAGTTCATCTTTGGTGCAGCGAGGGTTATTCAAGTGATGTTTATTGTTGGAGAGACTTATTAGTGACCAACGATGATGGGATTGATCACTAGTTAATGGATCGTAAACCACAATTAGAATCTCacaaatcaaagaaaacaacaaaaaacgcATCGAATGCAAATTGGTGAAAGGTGCAGCGTTTGAACGATAGCCCGTGGCCGCTTAATAACGTGAAGGCTGCGCTGTGATGCTCAGTGATGCTGCTGTCTCTCGGCGCAGGTGATTGTCAGCGGCAGTGAGGGAATCACCGCTCTTCACTCTCGCGCTCCTCCAGAGCTCCACAGACCTTTCGTCGCTCCAGCACCGCCTGCGCGAGACGCGGATGACAAAGTTAAAACCGCAGGTGCGCGAATCGAAGCGTCCGTTTGCAGGCGTTACCGCGAAGAAGAGGAATTGCATCGCGAGGCGTTCTGCGATGGCTTTATGAGGTTGTGTGTGAGATCTCCGGGAACAATCGAGAGCAGAATGCATAGACACGCGACGAGAGAGACCTTCCTCGTCCTCTTCCTCATCATCAGTCTGATGTGGCCCATACATTCAGAGATCTCCAACTGCGTCATCAAACGTGAGGAGGAGAGATGCTTGGAGAGAATTGCCCTGCACAACCCTAAAGATGACAGCAACGTGGAGTGTCCGTGGGAGTGGGACAATCTGACCTGCTGGAAGGCGGCCAGCGTCGGCGAGGTCGTGGAGGTCAACTGTCCCGAGCTCTTCGAGTTCATGAGTCCAGAGGAGGGACTCGGCAAGATCAGCAGAAACTGTACAGAGTTCGGTTGGTCTGAGCCATATCCACACTATGTTGATGCCTGTATGACTGGTGACAACACAACCAAACCTGACATATACTATGCGTCTGTGAAAGCTCTTTATACGGTGGGCTACAGCACGTCTCTGGTGTCTCTGACCACAGCTATGGTCATTCTGTGCCGCTTCAGGAAGCTTCACTGCACCAGGAACTTCATCCACATGAACCTGTTTGTGTCTTTCATCCTGAGAGCCATCTCCGTGTTCATTAAAGACGGGGTCCTGTACGCTGAGGAGGACAGCGACCACTGCTTCGTTCACACTGTTGGGTGTAAAGCAGTGATGGTCTTCTTCCATTACTGTGTGATGTCAAACTACTTCTGGCTCTTCATCGAGGGTCTCTATCTCTTCACGCTCCTGGTGGAAACCTTCTTTCCTGAGAGACGCTACTTCTACTGGTACACCATCATCGGCTGGGGAACGCCCACCATTTGTGTGACCATATGGGCCGTTCTGCGCCTTCATTTTGATGATTCTGGtTGCTGGGACATGAATGATAATACTGCCCTCTGGTGGGTGATCAAGGGACCCGTTGTGGCGTCAATCATGATTAATTTTGTCCTCTTCATTGGAATCATCATAATCCTGGTGCAGAAGCTGCAGTCTCCAGACATTGGCGGGAACGAGTCCAGCATCTACCTGCGTCTGGCGCGCTCCACCCTGCTCCTCATTCCTCTGTTCGGAATCCACTACACTGTTTTCGCCTTCTCCCCGGAGGATTTCAGCAAACGGGAGCGACTGGTCTTTGAGCTGGGCCTGGGCTCCTTCCAGGGGTTTGTTGTTGCCGTGCTGTACTGCTTTCTGAATGGAGAGTTTCTCCCTAAAGGTGCAGTCGGAGATAAAGAGGAAATGGAGGAGTTGGACGGTGAACAGGTACTTTGCTGTGGACCTGAAGCAGCAGCGTCACCCCTCGCTAGCGAGCAGTGGGGTGAACGGGGGGACGCAGCTGTCCATCCTCAGCAAGAGCAGCTCGCAGATACGCATGTCCAGCCCTCTGGCCGAGACGGTCAACCTCAATCTGCCCACCTGAGCGCCTGATTGGCCCGTCCGTCCATAAGCCCCGCCCTCCAACTCACCCTCTTCACCTGCAGTCGGGCCGACCAACCACAATTAGACAAGAACtagtaataattaaagaaatCTCTGGATAGCATTTAAAGATTACAAACAAGATCCCGAACGTATCACCCATTATCGGTTAGAAACGATTCGACCAGGGAAATATTAATAGTGCCAAAACTGTTTTGAGCTTAAAAGTTGCAATTCAGGTTAGGAAGCTTTTTTGACCACAACTCAACTTTTTGAAGGCTTTCTAATTAATCTAATGAGTAAATAAGCATAAAAGAATGTTACTTTCAATCAATAATAATGCGGTACAGGGGCTGTACGATTCACACCGCAATGCCAAAACGAGATCTCGGCGGAAATTGGAGTGAATTTTCATATCGCATTTTGAGCCATAGAGAATGTGAACGGTTTGTGGTTAGAATGTAGTCTGAGAAACATCGATCCATCCAACAGCACATTGCTTTAGTTTAAGTGAAAATCAGatatcagagagagagagagagagagagagagagagagagcgggttatatttcagtgttacgttaaaatataataatataaagtgccaaaacatgaatatttcagtattGTTTTATCTGCAAGCTACTGTGTTTATCAAAAGTACACTATAAAAGAAAATTTACTCGTTGCTCGTTCAGATGCTGTGTATTTGATTTAATGTTCTCCACAGAgagattgtaaaatgtatttttttacaatcaGCCGTAAGTACAAAGTATGTCAAAGACTTATGAATGACTCATGAATTTAgattatatgtaaatgttgttATGGTTTTGTGATTTAGCTTTTGGCTTGTGTTTTCTTATTGTCATGCGAATGGTTTGTAACTACAGAGCCAATATCAACAAATCAAGGATTGTCAAAAAAAACAGTTCCGTAAACAATTACTGGAGCGAGGAGGCTATTCCACAATTCCCTCTGATTTATTCTAAAGTGCCTGATGGTCACAAAAATAGCTTTGATGGATCTACTCTAAACAACCAGTGCCATGCagtattgatttaattattagtctttaagtAGATTTGATGAACAATTTCATTGTTCAAGTTTGCTTTTACAATCTTTAATGTCTACATACTGTAGGAACGTATTAATTTATACGCAGTATTAGAGTGCATATTGACATTGTAGAGCTTTGAAATGCGCAAATCAATGCCATTAAGTTACTATCAGGTgcattataaatgcttttaggGCTGACGTGTTCAACTGTGAGAGAAATCAGACATTTAAGTGAGATGTGAAAGTGCTAAAaggatatttcacccaaaatcgCTGATTCTGTCAGAATGCACTCACCTTCGTGTCATACCAGAcctgattttttaaatgtttgtactCTTAGAATAATAAAGTAAGAAATGTTAAGCTCCAAAATAGCTCTCATACGAATTACTTTTgtgatgctttttgtttttgttgttcatatTCGAGCTCGGCAGTCTGTGATCACTATATGTTGCATGTAAACAAGTGAAATGGCACGAagatgagtgaatgatgacgggttttgattcatttttgagtgaacgcTTTTAATGCTTGAGAGACAGGTAACCCCCAACCCTTTACGAGTACAATATCTGATGTCAATCTATGAATCCAACCAAATTTCATGCATCACCACTGACTGACAATCATAATTAGTTATCATCACTCACGTTTCGCGAAAAATAACATGCATCAGTGTGCAAAGTGGCAAGAGCGTCTGCtaaaagtgttgtttatttCAGTACAGTATTCTCTGCCGTGAGTAAATTTTCCGTAGACGCACATGTGCCAGTAAATGATAGATGTACCAGCGCTCTCTCTTTAGTCAACACTTGGGGTCATAAAGTACCAACGATGTATGTAAAACTTCTGTGATTATAAACGTGCCGATTTTGAAATGCAATACGCTTTTGTTGCAGATCATAGCTGTCGGTGAATCACATGGTGGCAGAGTTATGGTGATTGTCGAAATGTACAGTTGTGATGGTCGTGTAGATCGCGcagatcttttaaaaaatgttttcttttgattgTTATGTGTGATCGACAAACGagactgcaaaaataattacagtaggTTTCAACGCCCCTCATCTTTCATTGGCTGGATCAAACATAGCCCCGCCCATCGTGCGGTTAGTTGAGACGGATCGcgcttttctttgaaaaatatttctgatgtAAAATACCACTTCTGTATTTAATTATGCAGagacaaatataaaatcatttgtagctggatttttgtaaaaaaaaaaattaaaaagtgtaaacACTGTGGCTCTTTGGTGCTAAAAGCTTGTTTGTTTGAGCATCGCCAACTGCAGCATTAGCTCAAGCAATGGTGTGGAATCGGGGCGGGAGTATCCGGCCAATGGCAAATGAggaaagtcattatttttgcaattctgcTCAGTTCGGCGGGAATTAAACCCTTAAGTTCTCACCACTGATGACAAAAGCATTTGTTTCCGAGCTTTCTCATTTTTCTTATCCTCTTTATTTTTCGACCTGTAAATACTATGATCTTGAACAAGCTCCCAGTGATAGTGAACTTGTCTGTAGAAATAAATTGTGAATCCTAACGGAGAGCGATGTTGCTTGGATCACGTGACCTTACAGCTTCATATGTGTTTGGATATATGAGGGCCAGAGCTCCCTCTGTGGCTCTTTCTAGATAtatctgcatgaaaaaaagacaaaaaagagacaGTCTCTGCTGCTTTCTATGTTCTTGACACCAGCTGTCATTCTGAGTGTGAGCTCAGAAGGTAACGACCATGTCTCAAAGCTGTTACAGACGTGTTTTCTTGTGCTTGTAACACATCTGCCTGCCAGTGGGTGACGCTTTTTCTTTGATTGTATATTTGAGCACTGTATATTTGAGGAACGAGGAGATAAGTGGGAGATTTGACGTGTCTCTGGTGTAGGTCTGACATGTTTCATTGTGTCTTTGAGATGTCTTCATATTGTGGACTAATTCATTTCAATCTGAATGTAACACTCAGACAACAACTGTATCGTACATTCAGCTGCTCTGTAAAGCTGCCTGCTATTTCTTCTGCTTTGATGTAGAAATGATGTCCATGTTTGACCTGTGAACATTTTTGTACATGTCTGAATTCCATTCTTGACAAACAACTCTTGAATTTA

Function

GO:

id name namespace
GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway biological_process
GO:0007200 phospholipase C-activating G protein-coupled receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004999 vasoactive intestinal polypeptide receptor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU22492 lncRNA upstream 157982 24788885 ~ 24840993 (+) True G15165
TU22524 lncRNA upstream 182545 24813299 ~ 24816430 (+) True G15189
TU22497 lncRNA upstream 201411 24796813 ~ 24797564 (+) True G15169
TU22484 lncRNA upstream 244384 24687556 ~ 24754591 (+) False zcchc2
TU22350 lncRNA upstream 396183 24523424 ~ 24602792 (+) True G15071
TU22581 lncRNA downstream 79529 25105703 ~ 25210816 (+) True G15225
TU22584 lncRNA downstream 79529 25105703 ~ 25169740 (+) False G15225
TU22600 lncRNA downstream 85087 25111261 ~ 25115138 (+) True G15236
TU22605 lncRNA downstream 97126 25123300 ~ 25145006 (+) True G15240
TU22593 lncRNA downstream 123081 25149255 ~ 25157235 (+) True G15233
XM_043264451.1 mRNA upstream 20230 24964026 ~ 24978745 (+) True fyco1b
XM_043264471.1 mRNA upstream 20230 24964026 ~ 24978745 (+) False fyco1b
XM_043264460.1 mRNA upstream 20230 24964094 ~ 24978745 (+) False fyco1b
XM_043264479.1 mRNA upstream 20230 24966026 ~ 24978745 (+) False fyco1b
XM_043265044.1 mRNA upstream 64440 24931582 ~ 24934535 (+) True neurod6b
XM_043265067.1 mRNA downstream 25096 25051270 ~ 25062510 (+) False eef1da
XM_043265118.1 mRNA downstream 25096 25051270 ~ 25062510 (+) False eef1da
XM_043265142.1 mRNA downstream 25096 25051270 ~ 25062510 (+) False eef1da
XM_043265084.1 mRNA downstream 25111 25051285 ~ 25062510 (+) True eef1da
XM_043265076.1 mRNA downstream 25111 25051285 ~ 25062510 (+) False eef1da
TU22338 other upstream 499290 24493438 ~ 24499685 (+) True G15065
TU22269 other upstream 910534 24083838 ~ 24088441 (+) False LOC122327442
XR_006247041.1 other upstream 1060032 23935921 ~ 23938943 (+) True LOC122323670
unassigned_transcript_256 other upstream 1261853 23737051 ~ 23737122 (+) True trnaw-cca_1
TU21973 other upstream 1451001 23545106 ~ 23547974 (+) True G14831
unassigned_transcript_258 other downstream 15255 25041429 ~ 25041511 (+) True trnal-uaa
unassigned_transcript_259 other downstream 15809 25041983 ~ 25042065 (+) True trnal-uaa_1
unassigned_transcript_260 other downstream 16363 25042537 ~ 25042619 (+) True trnal-uaa_2
unassigned_transcript_261 other downstream 17016 25043190 ~ 25043271 (+) True trnal-uaa_3
unassigned_transcript_262 other downstream 17569 25043743 ~ 25043825 (+) True trnal-uaa_4

Expression Profile