RNA id: XM_043264908.1


Basic Information

Item Value
RNA id XM_043264908.1
length 1539
RNA type mRNA
GC content 0.52
exon number 9
gene id LOC122363040
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 25300200 ~ 25304723 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACGGTCTGTCTGTTTATGTGACAGATCCGGTAGCGAATACAGCCGTCCGAAGAAGCGTTATGTCAGTCTGTTCTTGTGGAGTTTTCCCGTACCGTACTGATACTAATGTCTCCTACAAACGCCGATGCAATGCAAGACGAGACTGACACCGAGCAGACCTCTGGGAACTGGTCTTGGTGGCCCTCTTGGAGACCAACATCCATGTCACTATTGAAAAGTGCCGAAGCTAAAATTCTCGCCTGTCTCCAGAATGACGTTTGGTCCAGGTTTGTGACGTTGCCAAATCAAAACCGAATATGGACCCTTAAAGTCACCGATAAATCAGCCCGCAAGCATAAAGCTGAAGCCGCTCAGACGCCCCTAGTGATGATCCACGGCTTTGGAGGCGGCGTCGGCCTCTGGATCCGAAACCTGGACGCTTTGAGTCAGTCTCGACCCGTCTACGCCTTCGACCTGCTGGGCTTCGGTCGCAGCTCTCGGCCCTCGTTCCCGTCTGACGCCTCGTTGGCTGAGGAGCAGTTTGTGTCTTCCATAGAGCACTGGAGACAGTCACTGGGGCTGGAGCGCATGATCCTATTGGGCCACAGCCTGGGTGGTTACCTGGCAACATCCTACACGATCCAACATCCGGAAAGAGTCAGTCACCTCATCCTGGTGGATGCGTGGGGTTTCCCTGAACGACTTCAGCCTCAGTTACAGGGGTCAGGAGGTCAAGGGTCAGAGGTTAAAAGGGTCTCACCTCCTCGCTGGGTGAAAGCTGTGGTGTCAGTGTTCAGCTTCTTCAACCCGCTGGCCGTCATCAGAGCGGCCGGACCCTGGGGTCCAGGGCTGGTGAACCGATTCCGTCCCGACTTCAAGAGGAAGTTTGAGGATCTGTTTGATGACGACACCATGACGCAGTATATTTATCACTGTAACGCTCAGAACCCGAGTGGTGAGGTGGGCTTTAAAGCCATGTGTGAGTCTCTCGGCTGGGCCAAGAGGCCGATGGTTCAGCGTGTTCATCTGCTGCCCCCGTCGATGCCCGTCAGCATGCTGTACGGCTCTCTGTCCTGGGTGGACTCGTCCACCGGAAACACGGTCGCTCAGATGCGAGGCAGAAGCCCCACCAGCATCACGCTGATCGAAGATGCTTCCCATCACGTCTACGCCGACCAGCCCGAAGAGTTCAACCGAGTGGTGGAGAGTATTTGTAATACTGTAGACTGAATAAGACGCGCATCGGTTTGTAGGTGTgggcatttgtattttttaatgtggGATCAGATTGATAGAAACATTTAAAGGCAAAGCTGTTCTCAGACCTTGTCGCTTCTATTCTAATTTTACTATTTGTGGCCTTCAACGCGGAAAGGCTCTGTGATTGTTCTGCAGGGTTTAACGGAAGCTGGCTGTGTTTGTATATTCGAAGCTATATTTTCTCCAGATTTCTTTTCAATCACGCACTGAGGAGGCTTCGCCGTTAAACCCGTGTCACGAATGCATTGACAATGTTTGGAAAGTCATATTGactaaaagaagaaatgtttaataattcac

Function

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K13698 ABHD4; abhydrolase domain-containing protein 4

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU22581 lncRNA upstream 89384 25105703 ~ 25210816 (+) True G15225
TU22586 lncRNA upstream 93270 25199691 ~ 25206930 (+) True G15226
TU22584 lncRNA upstream 130460 25105703 ~ 25169740 (+) False G15225
TU22593 lncRNA upstream 142965 25149255 ~ 25157235 (+) True G15233
TU22605 lncRNA upstream 155194 25123300 ~ 25145006 (+) True G15240
TU22818 lncRNA downstream 160727 25465450 ~ 25595289 (+) True G15392
XM_043264772.1 mRNA upstream 63591 25222144 ~ 25236609 (+) True LOC122362952
XM_043222921.1 mRNA upstream 80577 25216488 ~ 25219623 (+) True crygn1
XM_043264704.1 mRNA upstream 189424 25089791 ~ 25110776 (+) True lrrc24
XM_043265110.1 mRNA upstream 237690 25051286 ~ 25062510 (+) False eef1da
XM_043222945.1 mRNA downstream 89433 25394156 ~ 25406903 (+) True LOC122327519
XM_043216497.1 mRNA downstream 110796 25415519 ~ 25419928 (+) True LOC122322894
XM_043263859.1 mRNA downstream 187537 25492260 ~ 25516180 (+) True LOC122362387
XM_043258956.1 mRNA downstream 266418 25571141 ~ 25574135 (+) True LOC122358952
XM_043258919.1 mRNA downstream 276077 25580800 ~ 25591012 (+) True LOC122358930
XR_006253181.1 other upstream 63591 25222144 ~ 25236609 (+) False LOC122362952
TU22577 other upstream 124912 25170736 ~ 25175288 (+) True G15224
unassigned_transcript_272 other upstream 249561 25050557 ~ 25050639 (+) True trnal-uaa_14
unassigned_transcript_271 other upstream 250514 25049604 ~ 25049686 (+) True trnal-uaa_13
unassigned_transcript_270 other upstream 251068 25049050 ~ 25049132 (+) True trnal-uaa_12
TU22800 other downstream 89608 25394331 ~ 25397882 (+) False LOC122327519
TU22814 other downstream 187537 25492260 ~ 25502158 (+) False LOC122362387
TU22813 other downstream 191340 25496063 ~ 25502158 (+) False LOC122362387
TU22853 other downstream 294738 25599461 ~ 25599926 (+) True G15410

Expression Profile