Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_006252672.1 |
| length | 1158 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | LOC122359002 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056700.1 |
| NCBI id | CM032069.1 |
| chromosome length | 25613461 |
| location | 21810929 ~ 21812903 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0030163 | protein catabolic process | biological_process |
| GO:1901565 | organonitrogen compound catabolic process | biological_process |
| GO:0009057 | macromolecule catabolic process | biological_process |
| GO:1901575 | organic substance catabolic process | biological_process |
| GO:0044257 | cellular protein catabolic process | biological_process |
| GO:0044265 | cellular macromolecule catabolic process | biological_process |
| GO:0051603 | proteolysis involved in cellular protein catabolic process | biological_process |
| GO:0008537 | proteasome activator complex | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU21153 | lncRNA | upstream | 90354 | 21719918 ~ 21720575 (+) | True | G14316 |
| TU21152 | lncRNA | upstream | 92937 | 21716771 ~ 21717992 (+) | True | G14315 |
| TU21083 | lncRNA | upstream | 189832 | 21533245 ~ 21621097 (+) | False | ece2a |
| TU21112 | lncRNA | upstream | 253531 | 21556844 ~ 21557398 (+) | True | G14285 |
| TU21010 | lncRNA | upstream | 440430 | 21365808 ~ 21370499 (+) | True | G14212 |
| TU21366 | lncRNA | downstream | 36304 | 21849207 ~ 21850069 (+) | False | LOC122327294 |
| TU21368 | lncRNA | downstream | 39001 | 21851904 ~ 21852835 (+) | False | LOC122327294 |
| TU21373 | lncRNA | downstream | 52835 | 21865738 ~ 21866839 (+) | False | fndc7a |
| TU21375 | lncRNA | downstream | 81705 | 21894608 ~ 21895131 (+) | True | G14476 |
| TU21376 | lncRNA | downstream | 82268 | 21895171 ~ 21895478 (+) | True | G14477 |
| XM_043259016.1 | mRNA | upstream | 1597 | 21794688 ~ 21809332 (+) | False | wdr47a |
| XM_043259036.1 | mRNA | upstream | 1597 | 21794925 ~ 21809332 (+) | True | wdr47a |
| XM_043259027.1 | mRNA | upstream | 1597 | 21794925 ~ 21809332 (+) | False | wdr47a |
| XM_043219111.1 | mRNA | upstream | 17339 | 21754405 ~ 21793590 (+) | True | camsap2b |
| XM_043224622.1 | mRNA | upstream | 94639 | 21714683 ~ 21716290 (+) | True | ccl20a.3 |
| XM_043259049.1 | mRNA | downstream | 2297 | 21815200 ~ 21819162 (+) | True | LOC122358999 |
| XM_043259004.1 | mRNA | downstream | 5979 | 21818882 ~ 21827232 (+) | True | nlrp1 |
| XM_043222534.1 | mRNA | downstream | 30672 | 21843575 ~ 21853007 (+) | True | LOC122327294 |
| XM_043219847.1 | mRNA | downstream | 44309 | 21857212 ~ 21867399 (+) | True | fndc7a |
| XM_043222546.1 | mRNA | downstream | 83773 | 21896676 ~ 21911669 (+) | True | fndc7rs1 |
| TU21151 | other | upstream | 94642 | 21715355 ~ 21716287 (+) | False | ccl20a.3 |
| TU21079 | other | upstream | 328611 | 21481676 ~ 21482318 (+) | False | LOC122354659 |
| TU21005 | other | upstream | 449221 | 21307407 ~ 21361708 (+) | False | G14211 |
| TU21370 | other | downstream | 47988 | 21860891 ~ 21861442 (+) | True | G14471 |
| unassigned_transcript_253 | other | downstream | 115844 | 21928747 ~ 21928819 (+) | True | trnam-cau_1 |
| TU21525 | other | downstream | 878348 | 22691251 ~ 22695330 (+) | True | fcer1gl |
| TU21973 | other | downstream | 1732203 | 23545106 ~ 23547974 (+) | True | G14831 |
| unassigned_transcript_256 | other | downstream | 1924148 | 23737051 ~ 23737122 (+) | True | trnaw-cca_1 |
