RNA id: unassigned_transcript_191



Basic Information


Item Value
RNA id unassigned_transcript_191
length 75
RNA type tRNA
GC content 0.62
exon number 1
gene id trnag-gcc_7
representative True

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 5998143 ~ 5998217 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gcggtccttggtggttcagtggtagaattctcgcctgccacgcgggagacccgggttcgattcccggccaatgct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU14472 lncRNA upstream 138191 5852269 ~ 5859952 (+) True G9692
TU14470 lncRNA upstream 165453 5832357 ~ 5832690 (+) True G9690
TU14425 lncRNA upstream 167028 5770058 ~ 5831115 (+) True G9667
TU14431 lncRNA upstream 273127 5724701 ~ 5725016 (+) True G9671
TU14420 lncRNA upstream 280737 5717178 ~ 5717406 (+) True G9663
TU14477 lncRNA downstream 143825 6142042 ~ 6142865 (+) True G9697
TU14570 lncRNA downstream 377926 6376143 ~ 6376597 (+) True G9758
TU14665 lncRNA downstream 504173 6502390 ~ 6502594 (+) True G9825
TU14667 lncRNA downstream 513947 6512164 ~ 6512394 (+) True G9827
TU14674 lncRNA downstream 524588 6522805 ~ 6523467 (+) True G9834
XM_043262112.1 mRNA upstream 159510 5836648 ~ 5838633 (+) True LOC122361161
XM_043223488.1 mRNA upstream 171893 5824154 ~ 5826250 (+) False dusp28
XM_043219558.1 mRNA downstream 237653 6235870 ~ 6239694 (+) True crfb16
XM_043255183.1 mRNA downstream 250831 6249048 ~ 6255573 (+) True mb21d2
XM_043217069.1 mRNA downstream 259334 6257551 ~ 6337572 (+) False fgf12a
XM_043217065.1 mRNA downstream 277799 6276016 ~ 6337572 (+) False fgf12a
XM_043217047.1 mRNA downstream 287705 6285922 ~ 6337572 (+) True fgf12a
unassigned_transcript_190 other upstream 5985 5992088 ~ 5992158 (+) True trnag-gcc_6
unassigned_transcript_189 other upstream 16910 5981163 ~ 5981233 (+) True trnag-gcc_5
unassigned_transcript_188 other upstream 20154 5977915 ~ 5977989 (+) True trnag-gcc_4
unassigned_transcript_187 other upstream 23357 5974715 ~ 5974786 (+) True trnag-gcc_3
unassigned_transcript_186 other upstream 26550 5971519 ~ 5971593 (+) True trnag-gcc_2
unassigned_transcript_192 other downstream 2398 6000615 ~ 6000689 (+) True trnag-gcc_8
unassigned_transcript_193 other downstream 6465 6004682 ~ 6004756 (+) True trnag-gcc_9
unassigned_transcript_194 other downstream 10117 6008334 ~ 6008408 (+) True trnag-gcc_10
unassigned_transcript_195 other downstream 22749 6020966 ~ 6021040 (+) True trnag-gcc_11
unassigned_transcript_196 other downstream 28657 6026874 ~ 6026948 (+) True trnag-gcc_12