RNA id: unassigned_transcript_206



Basic Information


Item Value
RNA id unassigned_transcript_206
length 73
RNA type tRNA
GC content 0.54
exon number 1
gene id trnak-cuu_1
representative True

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 10389551 ~ 10389623 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCCCggctagctcagtcggtagagcatgagACTCTTAATCTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU16322 lncRNA downstream 69186 10318984 ~ 10320365 (-) False ca8
TU16318 lncRNA downstream 162695 10226218 ~ 10226856 (-) True G10987
TU16144 lncRNA downstream 229487 10158578 ~ 10160064 (-) True G10869
TU16114 lncRNA downstream 293849 10095217 ~ 10095702 (-) False hfm1
TU16112 lncRNA downstream 296893 10090936 ~ 10092658 (-) False hfm1
TU16351 lncRNA upstream 3073 10392696 ~ 10393162 (-) False fbxl7
TU16411 lncRNA upstream 276854 10666477 ~ 10666712 (-) True G11057
TU16424 lncRNA upstream 278019 10667642 ~ 10668053 (-) False G11064
TU16425 lncRNA upstream 278191 10667814 ~ 10668967 (-) True G11064
TU16426 lncRNA upstream 278191 10667814 ~ 10668124 (-) False G11064
XM_043255291.1 mRNA downstream 69148 10314033 ~ 10320403 (-) True ca8
XM_043259401.1 mRNA downstream 113524 10223331 ~ 10276027 (-) False tox
XM_043259420.1 mRNA downstream 113525 10223331 ~ 10276026 (-) False tox
XM_043220440.1 mRNA downstream 231530 10146582 ~ 10158021 (-) True hs2st1a
XM_043255931.1 mRNA downstream 245842 10140937 ~ 10143709 (-) True lmo4
XM_043259536.1 mRNA upstream 3059 10392682 ~ 10421475 (-) True fbxl7
XM_043259542.1 mRNA upstream 3059 10392682 ~ 10418137 (-) False fbxl7
XM_043259720.1 mRNA upstream 40171 10429794 ~ 10433121 (-) True LOC122359424
XM_043259604.1 mRNA upstream 75686 10465309 ~ 10476229 (-) True inhbab
XM_043259280.1 mRNA upstream 92047 10481670 ~ 10489280 (-) True afg3l2
TU16347 other downstream 11340 10376063 ~ 10378211 (-) True G11011
TU16135 other downstream 245883 10142043 ~ 10143668 (-) False lmo4
XR_006253077.1 other downstream 249966 10121767 ~ 10139585 (-) False pkn2a
TU15736 other downstream 870029 9500139 ~ 9519522 (-) False plppr5a
TU15605 other downstream 1201442 9187488 ~ 9188109 (-) False abca4b
TU16485 other upstream 368405 10758028 ~ 10764891 (-) True G11102
TU16480 other upstream 378351 10767974 ~ 10861554 (-) False LOC122359216
TU16478 other upstream 379892 10769515 ~ 10783951 (-) False LOC122359216
TU16500 other upstream 411093 10800716 ~ 10803288 (-) True G11105
TU16716 other upstream 946108 11335731 ~ 11339597 (-) False trnau1apb