RNA id: unassigned_transcript_263


Basic Information

Item Value
RNA id unassigned_transcript_263
length 83
RNA type tRNA
GC content 0.44
exon number 1
gene id trnal-uaa_5
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 25044396 ~ 25044478 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACCAGgatggccgagaggttaaggcgttGGACTTAAGATCCAATGGACAAATGTCCTCGTGGGTTCGAACCCCACTCCTGGTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU22492 lncRNA upstream 203403 24788885 ~ 24840993 (+) True G15165
TU22524 lncRNA upstream 227966 24813299 ~ 24816430 (+) True G15189
TU22497 lncRNA upstream 246832 24796813 ~ 24797564 (+) True G15169
TU22484 lncRNA upstream 289805 24687556 ~ 24754591 (+) False zcchc2
TU22350 lncRNA upstream 441604 24523424 ~ 24602792 (+) True G15071
TU22581 lncRNA downstream 61225 25105703 ~ 25210816 (+) True G15225
TU22584 lncRNA downstream 61225 25105703 ~ 25169740 (+) False G15225
TU22600 lncRNA downstream 66783 25111261 ~ 25115138 (+) True G15236
TU22605 lncRNA downstream 78822 25123300 ~ 25145006 (+) True G15240
TU22593 lncRNA downstream 104777 25149255 ~ 25157235 (+) True G15233
XM_043264786.1 mRNA upstream 18222 24998780 ~ 25026174 (+) False adcyap1r1a
XM_043264795.1 mRNA upstream 18222 24998967 ~ 25026174 (+) True adcyap1r1a
XM_043264804.1 mRNA upstream 18222 24998975 ~ 25026174 (+) False adcyap1r1a
XM_043264812.1 mRNA upstream 18222 24998976 ~ 25026174 (+) False adcyap1r1a
XM_043264479.1 mRNA upstream 65651 24966026 ~ 24978745 (+) False fyco1b
XM_043265067.1 mRNA downstream 6792 25051270 ~ 25062510 (+) False eef1da
XM_043265118.1 mRNA downstream 6792 25051270 ~ 25062510 (+) False eef1da
XM_043265142.1 mRNA downstream 6792 25051270 ~ 25062510 (+) False eef1da
XM_043265084.1 mRNA downstream 6807 25051285 ~ 25062510 (+) True eef1da
XM_043265076.1 mRNA downstream 6807 25051285 ~ 25062510 (+) False eef1da
unassigned_transcript_262 other upstream 571 25043743 ~ 25043825 (+) True trnal-uaa_4
unassigned_transcript_261 other upstream 1125 25043190 ~ 25043271 (+) True trnal-uaa_3
unassigned_transcript_260 other upstream 1777 25042537 ~ 25042619 (+) True trnal-uaa_2
unassigned_transcript_259 other upstream 2331 25041983 ~ 25042065 (+) True trnal-uaa_1
unassigned_transcript_258 other upstream 2885 25041429 ~ 25041511 (+) True trnal-uaa
unassigned_transcript_264 other downstream 472 25044950 ~ 25045032 (+) True trnal-uaa_6
unassigned_transcript_265 other downstream 1583 25046061 ~ 25046143 (+) True trnal-uaa_7
unassigned_transcript_266 other downstream 2236 25046714 ~ 25046796 (+) True trnal-uaa_8
unassigned_transcript_267 other downstream 2789 25047267 ~ 25047349 (+) True trnal-uaa_9
unassigned_transcript_268 other downstream 3362 25047840 ~ 25047922 (+) True trnal-uaa_10