RNA id: unassigned_transcript_265


Basic Information

Item Value
RNA id unassigned_transcript_265
length 83
RNA type tRNA
GC content 0.43
exon number 1
gene id trnal-uaa_7
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 25046061 ~ 25046143 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACCAGGATGGCCGAGCGGTTAAGGCGTTGGACTTAAGATCCAATGGACAAATGTCCTCGTGGGTTCGAACCCCACTCCTGGTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU22492 lncRNA upstream 205068 24788885 ~ 24840993 (+) True G15165
TU22524 lncRNA upstream 229631 24813299 ~ 24816430 (+) True G15189
TU22497 lncRNA upstream 248497 24796813 ~ 24797564 (+) True G15169
TU22484 lncRNA upstream 291470 24687556 ~ 24754591 (+) False zcchc2
TU22350 lncRNA upstream 443269 24523424 ~ 24602792 (+) True G15071
TU22581 lncRNA downstream 59560 25105703 ~ 25210816 (+) True G15225
TU22584 lncRNA downstream 59560 25105703 ~ 25169740 (+) False G15225
TU22600 lncRNA downstream 65118 25111261 ~ 25115138 (+) True G15236
TU22605 lncRNA downstream 77157 25123300 ~ 25145006 (+) True G15240
TU22593 lncRNA downstream 103112 25149255 ~ 25157235 (+) True G15233
XM_043264786.1 mRNA upstream 19887 24998780 ~ 25026174 (+) False adcyap1r1a
XM_043264795.1 mRNA upstream 19887 24998967 ~ 25026174 (+) True adcyap1r1a
XM_043264804.1 mRNA upstream 19887 24998975 ~ 25026174 (+) False adcyap1r1a
XM_043264812.1 mRNA upstream 19887 24998976 ~ 25026174 (+) False adcyap1r1a
XM_043264479.1 mRNA upstream 67316 24966026 ~ 24978745 (+) False fyco1b
XM_043265067.1 mRNA downstream 5127 25051270 ~ 25062510 (+) False eef1da
XM_043265118.1 mRNA downstream 5127 25051270 ~ 25062510 (+) False eef1da
XM_043265142.1 mRNA downstream 5127 25051270 ~ 25062510 (+) False eef1da
XM_043265084.1 mRNA downstream 5142 25051285 ~ 25062510 (+) True eef1da
XM_043265076.1 mRNA downstream 5142 25051285 ~ 25062510 (+) False eef1da
unassigned_transcript_264 other upstream 1029 25044950 ~ 25045032 (+) True trnal-uaa_6
unassigned_transcript_263 other upstream 1583 25044396 ~ 25044478 (+) True trnal-uaa_5
unassigned_transcript_262 other upstream 2236 25043743 ~ 25043825 (+) True trnal-uaa_4
unassigned_transcript_261 other upstream 2790 25043190 ~ 25043271 (+) True trnal-uaa_3
unassigned_transcript_260 other upstream 3442 25042537 ~ 25042619 (+) True trnal-uaa_2
unassigned_transcript_266 other downstream 571 25046714 ~ 25046796 (+) True trnal-uaa_8
unassigned_transcript_267 other downstream 1124 25047267 ~ 25047349 (+) True trnal-uaa_9
unassigned_transcript_268 other downstream 1697 25047840 ~ 25047922 (+) True trnal-uaa_10
unassigned_transcript_269 other downstream 2254 25048397 ~ 25048479 (+) True trnal-uaa_11
unassigned_transcript_270 other downstream 2907 25049050 ~ 25049132 (+) True trnal-uaa_12