RNA id: unassigned_transcript_268



Basic Information


Item Value
RNA id unassigned_transcript_268
length 83
RNA type tRNA
GC content 0.65
exon number 1
gene id trnal-uaa_10
representative True

Chromosome Information


Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 25047840 ~ 25047922 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ACCAGgatggccgagaggttaaggcgttGGACTTAAGATCCAATGGACAAATGTCCTCGTGGGTTCGAACCCCACTCTTGGTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU22492 lncRNA upstream 206847 24788885 ~ 24840993 (+) True G15165
TU22524 lncRNA upstream 231410 24813299 ~ 24816430 (+) True G15189
TU22497 lncRNA upstream 250276 24796813 ~ 24797564 (+) True G15169
TU22484 lncRNA upstream 293249 24687556 ~ 24754591 (+) False zcchc2
TU22350 lncRNA upstream 445048 24523424 ~ 24602792 (+) True G15071
TU22581 lncRNA downstream 57781 25105703 ~ 25210816 (+) True G15225
TU22584 lncRNA downstream 57781 25105703 ~ 25169740 (+) False G15225
TU22600 lncRNA downstream 63339 25111261 ~ 25115138 (+) True G15236
TU22605 lncRNA downstream 75378 25123300 ~ 25145006 (+) True G15240
TU22593 lncRNA downstream 101333 25149255 ~ 25157235 (+) True G15233
XM_043264786.1 mRNA upstream 21666 24998780 ~ 25026174 (+) False adcyap1r1a
XM_043264795.1 mRNA upstream 21666 24998967 ~ 25026174 (+) True adcyap1r1a
XM_043264804.1 mRNA upstream 21666 24998975 ~ 25026174 (+) False adcyap1r1a
XM_043264812.1 mRNA upstream 21666 24998976 ~ 25026174 (+) False adcyap1r1a
XM_043264479.1 mRNA upstream 69095 24966026 ~ 24978745 (+) False fyco1b
XM_043265067.1 mRNA downstream 3348 25051270 ~ 25062510 (+) False eef1da
XM_043265118.1 mRNA downstream 3348 25051270 ~ 25062510 (+) False eef1da
XM_043265142.1 mRNA downstream 3348 25051270 ~ 25062510 (+) False eef1da
XM_043265084.1 mRNA downstream 3363 25051285 ~ 25062510 (+) True eef1da
XM_043265076.1 mRNA downstream 3363 25051285 ~ 25062510 (+) False eef1da
unassigned_transcript_267 other upstream 491 25047267 ~ 25047349 (+) True trnal-uaa_9
unassigned_transcript_266 other upstream 1044 25046714 ~ 25046796 (+) True trnal-uaa_8
unassigned_transcript_265 other upstream 1697 25046061 ~ 25046143 (+) True trnal-uaa_7
unassigned_transcript_264 other upstream 2808 25044950 ~ 25045032 (+) True trnal-uaa_6
unassigned_transcript_263 other upstream 3362 25044396 ~ 25044478 (+) True trnal-uaa_5
unassigned_transcript_269 other downstream 475 25048397 ~ 25048479 (+) True trnal-uaa_11
unassigned_transcript_270 other downstream 1128 25049050 ~ 25049132 (+) True trnal-uaa_12
unassigned_transcript_271 other downstream 1682 25049604 ~ 25049686 (+) True trnal-uaa_13
unassigned_transcript_272 other downstream 2635 25050557 ~ 25050639 (+) True trnal-uaa_14
TU22577 other downstream 122814 25170736 ~ 25175288 (+) True G15224