RNA id: TU125173



Basic Information


Item Value
RNA id TU125173
length 635
RNA type TUCP
GC content 0.64
exon number 5
gene id G84485
representative False

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 12045 ~ 122767 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGATGGTGTTTCTGTCGAAGCAGGAAATGTTTTGATGTGAAGCGGATGTCGAGTCTCTCTCTGAATCTTCATGAGCAGCGCGGGTGACATCGAGCTCCATCAGTCATGGGCGAGCAAAGCATCTGTCAGGCGCGGGCCACCGTGATGATGTACGACGACGGCAGCAAGCGCTGGGTCCCGGCCGGCTCGGGCGCTCAGGCCGTCAGCAGGGTGCACATCTTCCAGAACCTCAGCAACAACAGCTTCAGGGTGGTGGGCCGCAAACAGCAGGCCGATCAGCAGGTGGTTATTAACTGTCCTCTGGTCCGGGGGCTGAAGTATAACCAGGCCACCCCGACCTTCCACCAGTGGCGTGATGCCCGTCAGGTCTGGGGTCTGAACTTCGGCAGTAAAGAAGACGCGGCTCAGTTCGCCGGCAGCATGATGCACGCGCTCGAGATGCTCAGCGGAGACGCCGGTGCGTGTCCTCCTCCTCGACCGCCTCCGAACGGCCCCAGCCCTGAGGAGACCGAGCAGAAGAGGAGACAGGagcagcaggagagagagacacgcGTCCGCCGCTCCAGCCCCGCCCCAGGTCCGCCTCCAGGCCCTCCCCCTGCTCCTGGCCCCGCCTCTGGTCCGCCTCCTCCCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU125191 lncRNA downstream 26145 88055 ~ 89574 (-) True G84492
TU125183 lncRNA upstream 17333 140100 ~ 141081 (-) True G84487
TU125201 lncRNA upstream 45357 168124 ~ 171286 (-) False LOC122355191
XR_006252194.1 lncRNA upstream 74134 196901 ~ 197393 (-) True LOC122355221
XR_006252193.1 lncRNA upstream 74633 197400 ~ 198867 (-) True LOC122355220
XR_006252187.1 lncRNA upstream 259805 382572 ~ 385020 (-) True LOC122355197
XM_043254423.1 mRNA downstream 4593 103795 ~ 111126 (-) True LOC122355848
XM_043254426.1 mRNA downstream 4595 103795 ~ 111124 (-) False LOC122355848
XM_043254424.1 mRNA downstream 4789 103795 ~ 110930 (-) False LOC122355848
XM_043254427.1 mRNA downstream 4792 103795 ~ 110927 (-) False LOC122355848
XM_043254422.1 mRNA downstream 4825 103795 ~ 110894 (-) False LOC122355848
XM_043253242.1 mRNA upstream 45281 168048 ~ 171295 (-) False LOC122355191
XM_043253241.1 mRNA upstream 45281 168048 ~ 171295 (-) True LOC122355191
XM_043253257.1 mRNA upstream 48995 171762 ~ 176703 (-) True LOC122355205
XM_043254320.1 mRNA upstream 70966 193733 ~ 208068 (-) True LOC122355756
XM_043253266.1 mRNA upstream 95447 218214 ~ 222873 (-) True LOC122355212
TU125181 other downstream 8069 78617 ~ 107650 (-) False G84486
TU125192 other downstream 21918 91490 ~ 93801 (-) True G84493
TU125175 other downstream 31574 81280 ~ 84145 (-) False G84486
TU125178 other downstream 34880 78617 ~ 80839 (-) False G84486
TU125172 other downstream 96186 12045 ~ 19533 (-) False G84485
TU125247 other upstream 196563 319330 ~ 321260 (-) True G84521
XR_006252248.1 other upstream 217506 340273 ~ 360312 (-) False prr12a
XR_006252247.1 other upstream 217506 340273 ~ 360312 (-) False prr12a
XR_006252246.1 other upstream 217506 340273 ~ 360312 (-) False prr12a
TU125629 other upstream 768365 891132 ~ 897030 (-) False dlx4b

Expression Profile