RNA id: TU126483



Basic Information


Item Value
RNA id TU126483
length 836
RNA type TUCP
GC content 0.36
exon number 2
gene id G85366
representative True

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 3258531 ~ 3299688 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


tttttttccagccaaGGACAACTACATACATTACACATGAAAAACATGTTGAAGTGTCTGAATCCACAGTTAAACAACATACAGTATTTATCATCGGGGTCGCTGACTCTGCTTGCATTCACACCAATACTAACACATGGACCTTTTTCACATGTCTATGTTACCATTTGCTTgagtagcatttttttttactttacaaaacagaataaaaatatagagataCGGGAGTCAGACGACAGAAATACTGTATGTCGAATTTGCCATCTCTTCCTCATGTGCAACTACATTGTAATTGGCAAGGCAATACAGAACAAAGTAGTGTTATGTACAGTTTGTACAAAAGTACATTGTaatttaaagagacagagagagagagagagcgagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagacacagagagagagagagagatacacacagagagagagagagagaaagagagagagacacagagagagagagagagagagagagagagagagagacagagatagaaagagagagagagagagagagatttaaaataataaataataataaaacttggCTAGATTTGCAACGTTTATAAAATAAGAGTCTGTGAAAAGGGTCCATTCAACAGTGTTCAGTGGATGCCTGTGCTTCGTTGGTAACACTTAAGGTtcaattaattaacattacGTAATGCATTAGGTAtcattaactaacaataaacaatagtGTTAATGTTCTacatatactaatatatttgttatttgctgaaaactcaaaaaaacatttcaagtacaaacattcattgaatt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU126466 lncRNA downstream 138805 3156816 ~ 3159743 (-) True G85355
TU126448 lncRNA downstream 260964 2950836 ~ 3037584 (-) True G85342
TU126331 lncRNA downstream 351159 2919185 ~ 2947389 (-) True G85257
TU126303 lncRNA downstream 428859 2869140 ~ 2869689 (-) True G85250
TU126283 lncRNA downstream 506025 2791920 ~ 2792523 (-) True G85235
TU126494 lncRNA upstream 73771 3373377 ~ 3374951 (-) False G85372
TU126495 lncRNA upstream 73771 3373377 ~ 3374951 (-) False G85372
TU126496 lncRNA upstream 73771 3373377 ~ 3374951 (-) True G85372
TU126516 lncRNA upstream 316236 3615842 ~ 3721023 (-) True G85389
TU126574 lncRNA upstream 661157 3960763 ~ 3961353 (-) True G85435
XM_043254261.1 mRNA downstream 195233 3089629 ~ 3103315 (-) True LOC122355711
XM_043254449.1 mRNA downstream 215195 3004429 ~ 3083353 (-) True LOC122355866
XM_043254446.1 mRNA downstream 234978 3005596 ~ 3063570 (-) False LOC122355866
XM_043254447.1 mRNA downstream 234978 3007485 ~ 3063570 (-) False LOC122355866
XM_043254050.1 mRNA downstream 420838 2870121 ~ 2877710 (-) True LOC122355586
XM_043254327.1 mRNA upstream 94049 3393655 ~ 3397535 (-) True LOC122355769
XM_043254328.1 mRNA upstream 198266 3497872 ~ 3540155 (-) True LOC122355770
XM_043254485.1 mRNA upstream 425478 3725084 ~ 3730449 (-) True c12h10orf88
XM_043253915.1 mRNA upstream 453972 3753578 ~ 3764451 (-) True vps35l
XM_043254294.1 mRNA upstream 466741 3766347 ~ 3881783 (-) False raraa
TU126462 other downstream 206135 3090785 ~ 3092413 (-) False LOC122355711
TU126277 other downstream 517195 2767908 ~ 2781353 (-) True G85232
unassigned_transcript_1807 other downstream 804757 2493710 ~ 2493791 (-) True trnal-uag_3
TU125823 other downstream 1351136 1870773 ~ 1947412 (-) False ank3b
TU125629 other downstream 2401518 891132 ~ 897030 (-) False dlx4b
unassigned_transcript_1808 other upstream 695485 3995091 ~ 3995185 (-) True trnal-uag_4
unassigned_transcript_1809 other upstream 695645 3995251 ~ 3995332 (-) True trnal-aag_33
unassigned_transcript_1810 other upstream 697145 3996751 ~ 3996830 (-) True trnal-uag_5
unassigned_transcript_1811 other upstream 698420 3998026 ~ 3998107 (-) True trnal-uag_6
unassigned_transcript_1812 other upstream 698588 3998194 ~ 3998274 (-) True trnal-aag_34

Expression Profile