RNA id: TU126689



Basic Information


Item Value
RNA id TU126689
length 277
lncRNA type inter_gene
GC content 0.31
exon number 1
gene id G85511
representative True

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 4175990 ~ 4176266 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CGAAAATACTTTATTGCATTACTCAATTACTTTCCAATTCCCATATCGACCAAACACGGATGGACAAAAATCTTtcgaataaataatataaaattgcatgaattaatgaattattcttGAATCAATGTTCAAGGGAACAGTAAGTATATTACAGTGATTTACTCGATACTGTTTGTTAGTTGCACTTTATATCATCAAATGAACTACGCCCACatgaaacatttgcattttaaacagacATCTGTCACTCTGCAGAAATATCTCAAATGAATTGAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU126648 lncRNA downstream 767 4117805 ~ 4175223 (-) True G85487
TU126574 lncRNA downstream 214637 3960763 ~ 3961353 (-) True G85435
TU126516 lncRNA downstream 454967 3615842 ~ 3721023 (-) True G85389
TU126494 lncRNA downstream 801039 3373377 ~ 3374951 (-) False G85372
TU126694 lncRNA upstream 7316 4183582 ~ 4188337 (-) True G85515
TU126717 lncRNA upstream 45024 4221290 ~ 4221493 (-) False kcnh6b
TU126718 lncRNA upstream 45248 4221514 ~ 4221766 (-) False kcnh6b
TU126730 lncRNA upstream 91737 4268003 ~ 4269616 (-) True G85541
TU126735 lncRNA upstream 99071 4275337 ~ 4277399 (-) False G85545
XM_043254160.1 mRNA downstream 5068 4167639 ~ 4170922 (-) True dnajc9
XM_043254366.1 mRNA downstream 22115 4139060 ~ 4153875 (-) False p4ha1a
XM_043254364.1 mRNA downstream 22115 4139060 ~ 4153875 (-) False p4ha1a
XM_043254367.1 mRNA downstream 22115 4139060 ~ 4153875 (-) True p4ha1a
XM_043253704.1 mRNA downstream 68746 4088710 ~ 4107244 (-) True ppp1r9bb
XM_043254332.1 mRNA upstream 41138 4217404 ~ 4230039 (-) True kcnh6b
XM_043253162.1 mRNA upstream 56283 4232549 ~ 4237229 (-) True LOC122355129
XM_043254333.1 mRNA upstream 122782 4299048 ~ 4305215 (-) True LOC122355775
XM_043253007.1 mRNA upstream 236307 4412573 ~ 4416897 (-) True LOC122355055
XM_043253609.1 mRNA upstream 753547 4929813 ~ 5055115 (-) True LOC122355389
unassigned_transcript_1877 other downstream 95808 4080101 ~ 4080182 (-) True trnal-uag_48
unassigned_transcript_1876 other downstream 96795 4079113 ~ 4079195 (-) True trnal-aag_57
unassigned_transcript_1875 other downstream 96968 4078941 ~ 4079022 (-) True trnal-uag_47
unassigned_transcript_1874 other downstream 98129 4077778 ~ 4077861 (-) True trnal-uag_46
unassigned_transcript_1873 other downstream 99093 4076819 ~ 4076897 (-) True trnal-aag_56
unassigned_transcript_1878 other upstream 169119 4345385 ~ 4345467 (-) True trnal-uag_49
unassigned_transcript_1879 other upstream 171432 4347698 ~ 4347779 (-) True trnal-uag_50
unassigned_transcript_1880 other upstream 171596 4347862 ~ 4347942 (-) True trnal-aag_58
unassigned_transcript_1881 other upstream 172599 4348865 ~ 4348946 (-) True trnal-uag_51
unassigned_transcript_1882 other upstream 173754 4350020 ~ 4350101 (-) True trnal-uag_52

Expression Profile