RNA id: TU126759



Basic Information


Item Value
RNA id TU126759
length 716
RNA type TUCP
GC content 0.41
exon number 3
gene id LOC122355720
representative True

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 4418247 ~ 4419213 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTTTTCTATTCTGAACTGGGAGATACTATTAACTAACTTACTAACTAAACAATCCaccaaaagcatttattatatgATGCAATGTTGCGTATATGAAATGTTTATGCTTGAGTTTTAGCATGGAGTGGAACGGAAGGTTGCTGGTCCAGTTGTTAATGCTGATGTGCGTGTTGGAGGTCAATCTTTGCCAGCACTGGTCATATGGTTGGCTTCCTGGTGGAAAGAGAAGCCTTGGTGAAGTGGAGGCAACATTTAGGATGATGGATGCTGGCGATGCAGTACTGTCCATTCCTGCAGATTCTCCAATAGAGCGGCTTTCACCGATACACATAGTGAATGAGGTGGACGCTGAAGGTTTGCCTCTGAAAGAACAGAGATTTCCCAACAGACGAGGAAGAGTGTAAAATCACAAAGCATGAAGATAAACCCTCGGAGCCAATGAGAATAAATTTAAGTTTTGTTCCACGTGAGCAGCATGTATTTTTGGAGTCCTACTGGAACATCCTCCTCGTATGGTTTTAATAAACGTACTGCATTTGAGGCACATCGCCTATACGGTTAATACCAAGTATGCctaatttgtttataattattattaaatgtgttcagAGATGAAGCAAAATTGCACAAACCGATCAAATACCCGAATGCCTTTCCCCCTCAATACAGACAATAGGATAACGTTACGCATCCAATCTTTTCTTCCACGTGGTGGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU126744 lncRNA upstream 105217 4312579 ~ 4313030 (+) True G85552
TU126742 lncRNA upstream 106303 4311467 ~ 4311944 (+) True G85550
TU126638 lncRNA upstream 188713 4228755 ~ 4229534 (+) True G85477
TU126586 lncRNA upstream 418768 3992786 ~ 3999479 (+) False G85444
TU126585 lncRNA upstream 419918 3992786 ~ 3998329 (+) False G85444
TU126782 lncRNA downstream 666448 5085661 ~ 5097704 (+) False LOC122355392
XR_006252213.1 lncRNA downstream 723687 5142900 ~ 5144378 (+) True LOC122355394
XR_006252212.1 lncRNA downstream 723687 5142900 ~ 5144378 (+) False LOC122355394
XR_006252214.1 lncRNA downstream 735441 5154654 ~ 5157732 (+) True LOC122355395
TU126873 lncRNA downstream 978350 5397563 ~ 5402712 (+) True G85661
XM_043253080.1 mRNA upstream 9842 4399596 ~ 4408405 (+) True LOC122355090
XM_043253259.1 mRNA upstream 140895 4275340 ~ 4277352 (+) False ndufa4b
XM_043253031.1 mRNA upstream 143282 4267987 ~ 4274965 (+) True fam117ab
XM_043254439.1 mRNA upstream 152441 4254314 ~ 4265806 (+) False rundc3ab
XM_043254334.1 mRNA downstream 282571 4701784 ~ 4827583 (+) True LOC122355776
XM_043253614.1 mRNA downstream 661952 5081165 ~ 5109046 (+) True LOC122355392
XM_043253610.1 mRNA downstream 764805 5184018 ~ 5237596 (+) True LOC122355390
XM_043253612.1 mRNA downstream 764805 5184018 ~ 5237596 (+) False LOC122355390
XM_043253611.1 mRNA downstream 764805 5184018 ~ 5237596 (+) False LOC122355390
TU126747 other upstream 14567 4401131 ~ 4403680 (+) False LOC122355090
TU126733 other upstream 140862 4275344 ~ 4277385 (+) True ndufa4b
TU126364 other upstream 1241438 3174189 ~ 3176809 (+) False LOC122355768
TU126288 other upstream 1597646 2814264 ~ 2820601 (+) False LOC122355426
TU126250 other upstream 1662316 2746044 ~ 2755931 (+) False LOC122355862
TU126761 other downstream 33642 4452855 ~ 4453275 (+) True G85567
TU126784 other downstream 669712 5088925 ~ 5089638 (+) True G85587
XR_006252205.1 other downstream 1467739 5886952 ~ 5953312 (+) False becn1
XR_006252206.1 other downstream 1467739 5886952 ~ 5943580 (+) False becn1
TU127259 other downstream 1676735 6095948 ~ 6096732 (+) True G85962

Expression Profile