RNA id: TU126764


Basic Information

Item Value
RNA id TU126764
length 861
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G85569
representative True

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 4411340 ~ 4412200 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGTTTAGGTAGGAGAAAACCTCATCAATAAGTTTTATTTCCTctaaacattaacaataatactgtttgtactgtgtattaggagttaaataaatacatgagtCACaggttttctatttaaataatgtattacgACTATTAATAGTCTCAAGCCAATGCTTTGCAGTTTATGTATATCTTTATAGCTTATAGTTTATATTTGAAGAAACTATGCGGTGAACGGCTCCTCTGGTTCGAGGTTATTGTAAGAGGTATGCAAATGGTATACTTGGGTGAATCTCACCAAGCTTGAAAAGAACATGCTTAGATCATATTTCAcactcaaaatataaaaaacatatttcaaattaaaaattaaggtATTGTACACTCTTTAAGGTGTACTTTTTACTTTTGCAATTTGTAGTTATGACAATTAAGCACATTGTTAAGCGCATTCTTAATACTGAAATGCATCTGGAAGTTTGTCATTTTCatgactttttaataataaaaagataaaatgaagGCATAAGCTAAACTTAGTACAACCAATGGGCTACAACTATAActtcatttttgcattgcagTAATTAGAATGAGGAGTTTGCGCTATTTATGAAGCTCATCATCATGAAAATCACAAAAACCCTAaaggtctttaaaaaaagaataattttctttttactattttttttttcttccttaaaACATCcagctaaaacaaaaaagaaaataataatatatagtttatacaaaaaaaactgtaccaTAATAATTTAATTCCAGAACTTAAGTATCAGCTCCTTCATGCAAAACACCCGATTTGTAGGATGTGTCATAGTTGTGCCATAGTTTCAGTGCAAGTGAAGAAAGGAGTTGC

Function

GO:

id name namespace
GO:0005811 lipid droplet cellular_component

KEGG:

id description
ko00983 Drug metabolism - other enzymes

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU126745 lncRNA downstream 98292 4312579 ~ 4313048 (-) True G85553
TU126743 lncRNA downstream 99436 4311453 ~ 4311904 (-) True G85551
TU126741 lncRNA downstream 106318 4297867 ~ 4305022 (-) False LOC122355775
TU126737 lncRNA downstream 126405 4275337 ~ 4284935 (-) True G85545
TU126735 lncRNA downstream 133941 4275337 ~ 4277399 (-) False G85545
TU126762 lncRNA upstream 424 4412624 ~ 4413362 (-) False LOC122355055
TU126767 lncRNA upstream 40555 4452755 ~ 4453276 (-) True G85572
TU127055 lncRNA upstream 1010884 5423084 ~ 5426127 (-) False lsm5
TU127056 lncRNA upstream 1010884 5423084 ~ 5426511 (-) False lsm5
TU127129 lncRNA upstream 1315104 5727304 ~ 5731090 (-) True G85868
XM_043254333.1 mRNA downstream 106125 4299048 ~ 4305215 (-) True LOC122355775
XM_043253162.1 mRNA downstream 174111 4232549 ~ 4237229 (-) True LOC122355129
XM_043254332.1 mRNA downstream 181301 4217404 ~ 4230039 (-) True kcnh6b
XM_043254160.1 mRNA downstream 240418 4167639 ~ 4170922 (-) True dnajc9
XM_043254367.1 mRNA downstream 257465 4139060 ~ 4153875 (-) True p4ha1a
XM_043253007.1 mRNA upstream 373 4412573 ~ 4416897 (-) True LOC122355055
XM_043253609.1 mRNA upstream 517613 4929813 ~ 5055115 (-) True LOC122355389
XM_043253608.1 mRNA upstream 522672 4934872 ~ 5042763 (-) False LOC122355389
XM_043253841.1 mRNA upstream 868181 5280381 ~ 5330233 (-) False ccser2b
XM_043253843.1 mRNA upstream 868181 5280381 ~ 5330233 (-) False ccser2b
unassigned_transcript_1919 other downstream 14847 4396412 ~ 4396493 (-) True trnal-uag_71
unassigned_transcript_1918 other downstream 18185 4393074 ~ 4393155 (-) True trnal-aag_72
unassigned_transcript_1917 other downstream 19504 4391754 ~ 4391836 (-) True trnal-uag_70
unassigned_transcript_1916 other downstream 21653 4389600 ~ 4389687 (-) True trnal-aag_71
unassigned_transcript_1915 other downstream 21812 4389446 ~ 4389528 (-) True trnal-uag_69
TU127021 other upstream 910278 5322478 ~ 5396912 (-) False G85779
TU127027 other upstream 910278 5322478 ~ 5396912 (-) True G85779
TU127020 other upstream 978408 5390608 ~ 5396912 (-) False G85779
TU127052 other upstream 1010884 5423084 ~ 5426511 (-) False lsm5
TU127053 other upstream 1010884 5423084 ~ 5426127 (-) True lsm5

Expression Profile