RNA id: TU127339



Basic Information


Item Value
RNA id TU127339
length 256
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G86024
representative True

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 6442818 ~ 6443073 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTTTGCAGTGGCTGGTGTGTATCCACGTAGCCCTCTCAGCCACCTTAACCGCAGTATGCGTTATCAGCAGGACCTGGAACGGGCCGTTCCACCTCCTTGATTTCCAATGTTTCCTTCTGAAATCCTTGACCACCACAAAATCACCAGGTCTGATGTCATGCAGAAATCCTTCTGCTGGTTTAGGTAGAGCGTCCTTGACCTgttgagagatctgagagagagtcgaagacagatttttacaatagttcaaCATGTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU127335 lncRNA downstream 1297 6440817 ~ 6441521 (-) True G86020
TU127332 lncRNA downstream 3484 6438900 ~ 6439334 (-) True G86017
TU127263 lncRNA downstream 344951 6097060 ~ 6097867 (-) True G85966
TU127230 lncRNA downstream 392168 6050200 ~ 6050650 (-) True G85939
TU127226 lncRNA downstream 409049 6033481 ~ 6033769 (-) True G85935
TU127341 lncRNA upstream 255 6443328 ~ 6443697 (-) True G86026
TU127345 lncRNA upstream 78753 6521826 ~ 6522579 (-) True G86030
TU127347 lncRNA upstream 79840 6522913 ~ 6523657 (-) True G86032
TU127371 lncRNA upstream 225854 6668927 ~ 6669464 (-) True G86048
TU127418 lncRNA upstream 522017 6965090 ~ 6965411 (-) True G86091
XM_043253679.1 mRNA downstream 162470 6197482 ~ 6280348 (-) False LOC122355417
XM_043253937.1 mRNA upstream 728323 7171396 ~ 7173368 (-) True hexim1
XM_043253936.1 mRNA upstream 731545 7174618 ~ 7182834 (-) False acbd4
XM_043253935.1 mRNA upstream 731545 7174618 ~ 7182834 (-) False acbd4
XM_043253933.1 mRNA upstream 731545 7174618 ~ 7182834 (-) False acbd4
XM_043253934.1 mRNA upstream 731545 7174618 ~ 7182834 (-) True acbd4
XR_006252215.1 other downstream 369386 6064298 ~ 6073432 (-) False LOC122355418
XR_006252216.1 other downstream 388465 6051723 ~ 6054353 (-) False LOC122355418
TU127212 other downstream 435711 5990913 ~ 6007107 (-) True G85930
TU127203 other downstream 455038 5984989 ~ 5987780 (-) True G85925
TU127053 other downstream 1016691 5423084 ~ 5426127 (-) True lsm5
TU127372 other upstream 227246 6670319 ~ 6671247 (-) True G86049
TU127438 other upstream 660807 7103880 ~ 7104218 (-) True G86108
TU127575 other upstream 945163 7388236 ~ 7388910 (-) True G86203
TU128131 other upstream 1905089 8348162 ~ 8359980 (-) False cpped1
XR_006252260.1 other upstream 2075162 8518235 ~ 8518365 (-) True LOC122355888

Expression Profile