RNA id: TU127371



Basic Information


Item Value
RNA id TU127371
length 538
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G86048
representative True

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 6668927 ~ 6669464 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CAATTCGAGGCACAGTACGACAGATCAGATGTGACCAAGGTACCAATTTCGTAGGTGCAAAGAACGAACTGAACTTGGCACTGCAGGAGCTCGATCCAGAAAGGCTCACTACTTTTTTGACCGACAAACAATGTGATTTCGTTTTGAATGCACCCCATTCTAGTCATGCAGGGGGTGTATGGGAACGGCAAATCAAAACTGTAAGGAGTGTTCTTAGTGCTACCATCACCCTTTCAGCAGGCAGGCTAGATGATGCTTCATTGCGCACCTTGCTTTATGAAGCCATGGCAATAATCAATAGTCGACCCCTTACAGTTGACAACCTGAATGACCCCAAGAGCTTAGAACCACTCACACCTAATCATCTGATTACCATGAAATCCACCACAGCCCTACCTCCACCAGGAAAGTTCATAAGAGAGGATGTGTATATGAGGAAGAGATGGAGACGTGTGCAGTATCTTACTGAACAGTTTTGGAGCAGATGGAAAAAAGAGTATCTCCACAACATCGCTGCTCGACAATGCTGGCATGCTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU127347 lncRNA downstream 145270 6522913 ~ 6523657 (-) True G86032
TU127345 lncRNA downstream 146348 6521826 ~ 6522579 (-) True G86030
TU127341 lncRNA downstream 225230 6443328 ~ 6443697 (-) True G86026
TU127339 lncRNA downstream 225854 6442818 ~ 6443073 (-) True G86024
TU127335 lncRNA downstream 227406 6440817 ~ 6441521 (-) True G86020
TU127418 lncRNA upstream 295626 6965090 ~ 6965411 (-) True G86091
XR_006252235.1 lncRNA upstream 331542 7001006 ~ 7002149 (-) False LOC122355669
XR_006252236.1 lncRNA upstream 331542 7001006 ~ 7002143 (-) True LOC122355669
TU127422 lncRNA upstream 332796 7002260 ~ 7002931 (-) True G86094
TU127426 lncRNA upstream 338362 7007826 ~ 7009113 (-) True G86096
XM_043253679.1 mRNA downstream 388579 6197482 ~ 6280348 (-) False LOC122355417
XM_043253937.1 mRNA upstream 501932 7171396 ~ 7173368 (-) True hexim1
XM_043253936.1 mRNA upstream 505154 7174618 ~ 7182834 (-) False acbd4
XM_043253935.1 mRNA upstream 505154 7174618 ~ 7182834 (-) False acbd4
XM_043253933.1 mRNA upstream 505154 7174618 ~ 7182834 (-) False acbd4
XM_043253934.1 mRNA upstream 505154 7174618 ~ 7182834 (-) True acbd4
XR_006252215.1 other downstream 595495 6064298 ~ 6073432 (-) False LOC122355418
XR_006252216.1 other downstream 614574 6051723 ~ 6054353 (-) False LOC122355418
TU127212 other downstream 661820 5990913 ~ 6007107 (-) True G85930
TU127203 other downstream 681147 5984989 ~ 5987780 (-) True G85925
TU127053 other downstream 1242800 5423084 ~ 5426127 (-) True lsm5
TU127372 other upstream 855 6670319 ~ 6671247 (-) True G86049
TU127438 other upstream 434416 7103880 ~ 7104218 (-) True G86108
TU127575 other upstream 718772 7388236 ~ 7388910 (-) True G86203
TU128131 other upstream 1678698 8348162 ~ 8359980 (-) False cpped1
XR_006252260.1 other upstream 1848771 8518235 ~ 8518365 (-) True LOC122355888

Expression Profile