RNA id: TU127422



Basic Information


Item Value
RNA id TU127422
length 483
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G86094
representative True

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 7002260 ~ 7002931 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTTCCTGTTTGCATAGCCAGCCTTCTAAGTGTAAACAACGGAAGCTgatgtctgtttttttcagttgctgAACCGTAGCAGTTGACCGCTTCAGTAATGCAGTGTATAGAAGAACCAGCAGTCACAGAGCAGCGTTCACCGGTTCCACCGCGGAGCGACCATATCTCCTTTCTGGAGGGAAACAAGCTGTACGTCTGGGGTGGCTACCAGtgtGTGGATGGACAAGAAACGTTTTTGCCCAGTGATGAGATCTGGCTTTATGACATGCAGAGTGGAGTTTGGTGAGATGCCATGTTTTACTTATCTGGCTTACTTGTTTTACTAAtaatttacacatatatatatatatatatatatatatcattttgtttacagtattttgCCTGCTGTGCTTCACTGCATTAAAACAGTGGGTGGTTCCAGAGTTACCTGAGGCTAGCATTACCATCCCCAAACAACATTTTCCCTGAGTTTCAATTACAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006252235.1 lncRNA downstream 111 7001006 ~ 7002149 (-) False LOC122355669
XR_006252236.1 lncRNA downstream 117 7001006 ~ 7002143 (-) True LOC122355669
TU127418 lncRNA downstream 36849 6965090 ~ 6965411 (-) True G86091
TU127371 lncRNA downstream 332796 6668927 ~ 6669464 (-) True G86048
TU127347 lncRNA downstream 478603 6522913 ~ 6523657 (-) True G86032
TU127426 lncRNA upstream 4895 7007826 ~ 7009113 (-) True G86096
TU127428 lncRNA upstream 8272 7011203 ~ 7011430 (-) True G86098
TU127548 lncRNA upstream 280955 7283886 ~ 7285998 (-) True G86184
TU127551 lncRNA upstream 283479 7286410 ~ 7287752 (-) True G86185
TU127556 lncRNA upstream 286239 7289170 ~ 7290516 (-) True G86187
XM_043253679.1 mRNA downstream 721912 6197482 ~ 6280348 (-) False LOC122355417
XM_043253937.1 mRNA upstream 168465 7171396 ~ 7173368 (-) True hexim1
XM_043253936.1 mRNA upstream 171687 7174618 ~ 7182834 (-) False acbd4
XM_043253935.1 mRNA upstream 171687 7174618 ~ 7182834 (-) False acbd4
XM_043253933.1 mRNA upstream 171687 7174618 ~ 7182834 (-) False acbd4
XM_043253934.1 mRNA upstream 171687 7174618 ~ 7182834 (-) True acbd4
TU127372 other downstream 331013 6670319 ~ 6671247 (-) True G86049
XR_006252215.1 other downstream 928828 6064298 ~ 6073432 (-) False LOC122355418
XR_006252216.1 other downstream 947907 6051723 ~ 6054353 (-) False LOC122355418
TU127212 other downstream 995153 5990913 ~ 6007107 (-) True G85930
TU127203 other downstream 1014480 5984989 ~ 5987780 (-) True G85925
TU127438 other upstream 100949 7103880 ~ 7104218 (-) True G86108
TU127575 other upstream 385305 7388236 ~ 7388910 (-) True G86203
TU128131 other upstream 1345231 8348162 ~ 8359980 (-) False cpped1
XR_006252260.1 other upstream 1515304 8518235 ~ 8518365 (-) True LOC122355888
XR_006252259.1 other upstream 1516049 8518980 ~ 8519109 (-) True LOC122355887

Expression Profile