RNA id: TU127426



Basic Information


Item Value
RNA id TU127426
length 546
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G86096
representative True

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 7007826 ~ 7009113 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AGTAGCCACTCTTATATTGTTTACACTTGACAGTTtgtacaaaatgtgaaataaatcccaaaagttacaaaaataaaagtagtagtGTGCAcactagaaaataaaaagaatgtcCGTTGGGccctaaacaaaaataaaaaaaattggttcCAGTGCATTTGCTGTAGAGGTTGTGCAGTTCACCTTGCTCCAAAGATACTTGTAAGGTAAGTATTATGTGCAGGTGGATAGGGAAATCGGTGCTGGACTTTCCTCAGTGGACTTGGCTCGCCATCGGAATCACTGGAGATGTTGGTTCTGGACAACATCcgtcctacaaaaaaaaaaATCTCACCGTTGCTCCGGGTATATCAAGGTGTAACGCGACGATGATGGACCTCGTGGCAACTTCCCAGACAAAAGGGCAAGTGGTTAGCCGACGTAACTTCGTTCTATAACACGACTCCGGATCTTCGGTGAAGTGTGCTCCGACGCTTTTTCCTTTTAGACAAACCTCCAAAATTTTGTCCTGGTTTTGACTCCTTGCTAACACACAGCTACCCCCGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU127422 lncRNA downstream 4895 7002260 ~ 7002931 (-) True G86094
XR_006252235.1 lncRNA downstream 5677 7001006 ~ 7002149 (-) False LOC122355669
XR_006252236.1 lncRNA downstream 5683 7001006 ~ 7002143 (-) True LOC122355669
TU127418 lncRNA downstream 42415 6965090 ~ 6965411 (-) True G86091
TU127371 lncRNA downstream 338362 6668927 ~ 6669464 (-) True G86048
TU127428 lncRNA upstream 2090 7011203 ~ 7011430 (-) True G86098
TU127548 lncRNA upstream 274773 7283886 ~ 7285998 (-) True G86184
TU127551 lncRNA upstream 277297 7286410 ~ 7287752 (-) True G86185
TU127556 lncRNA upstream 280057 7289170 ~ 7290516 (-) True G86187
TU127554 lncRNA upstream 281615 7290728 ~ 7292120 (-) True G86186
XM_043253679.1 mRNA downstream 727478 6197482 ~ 6280348 (-) False LOC122355417
XM_043253937.1 mRNA upstream 162283 7171396 ~ 7173368 (-) True hexim1
XM_043253936.1 mRNA upstream 165505 7174618 ~ 7182834 (-) False acbd4
XM_043253935.1 mRNA upstream 165505 7174618 ~ 7182834 (-) False acbd4
XM_043253933.1 mRNA upstream 165505 7174618 ~ 7182834 (-) False acbd4
XM_043253934.1 mRNA upstream 165505 7174618 ~ 7182834 (-) True acbd4
TU127372 other downstream 336579 6670319 ~ 6671247 (-) True G86049
XR_006252215.1 other downstream 934394 6064298 ~ 6073432 (-) False LOC122355418
XR_006252216.1 other downstream 953473 6051723 ~ 6054353 (-) False LOC122355418
TU127212 other downstream 1000719 5990913 ~ 6007107 (-) True G85930
TU127203 other downstream 1020046 5984989 ~ 5987780 (-) True G85925
TU127438 other upstream 94767 7103880 ~ 7104218 (-) True G86108
TU127575 other upstream 379123 7388236 ~ 7388910 (-) True G86203
TU128131 other upstream 1339049 8348162 ~ 8359980 (-) False cpped1
XR_006252260.1 other upstream 1509122 8518235 ~ 8518365 (-) True LOC122355888
XR_006252259.1 other upstream 1509867 8518980 ~ 8519109 (-) True LOC122355887

Expression Profile