RNA id: TU127428


Basic Information

Item Value
RNA id TU127428
length 228
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G86098
representative True

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 7011203 ~ 7011430 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ggaggagtacacagaggtggagaccagtaaaacaaaagtatgcaaatgcaatcaggaacttagcccagaacaggaactttcccgatccttgatctatttagcatccaagtgtcattcaaatgcataggtgaaacaaaaggcacagttgtaccttaggattagcattcacacttgacttaggacacctaccagatgttcaagaactgaaagacaaaagataactgtctc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU127426 lncRNA downstream 2090 7007826 ~ 7009113 (-) True G86096
TU127422 lncRNA downstream 8272 7002260 ~ 7002931 (-) True G86094
XR_006252235.1 lncRNA downstream 9054 7001006 ~ 7002149 (-) False LOC122355669
XR_006252236.1 lncRNA downstream 9060 7001006 ~ 7002143 (-) True LOC122355669
TU127418 lncRNA downstream 45792 6965090 ~ 6965411 (-) True G86091
TU127548 lncRNA upstream 272456 7283886 ~ 7285998 (-) True G86184
TU127551 lncRNA upstream 274980 7286410 ~ 7287752 (-) True G86185
TU127556 lncRNA upstream 277740 7289170 ~ 7290516 (-) True G86187
TU127554 lncRNA upstream 279298 7290728 ~ 7292120 (-) True G86186
TU127557 lncRNA upstream 286370 7297800 ~ 7298146 (-) True G86188
XM_043253679.1 mRNA downstream 730855 6197482 ~ 6280348 (-) False LOC122355417
XM_043253937.1 mRNA upstream 159966 7171396 ~ 7173368 (-) True hexim1
XM_043253936.1 mRNA upstream 163188 7174618 ~ 7182834 (-) False acbd4
XM_043253935.1 mRNA upstream 163188 7174618 ~ 7182834 (-) False acbd4
XM_043253933.1 mRNA upstream 163188 7174618 ~ 7182834 (-) False acbd4
XM_043253934.1 mRNA upstream 163188 7174618 ~ 7182834 (-) True acbd4
TU127372 other downstream 339956 6670319 ~ 6671247 (-) True G86049
XR_006252215.1 other downstream 937771 6064298 ~ 6073432 (-) False LOC122355418
XR_006252216.1 other downstream 956850 6051723 ~ 6054353 (-) False LOC122355418
TU127212 other downstream 1004096 5990913 ~ 6007107 (-) True G85930
TU127203 other downstream 1023423 5984989 ~ 5987780 (-) True G85925
TU127438 other upstream 92450 7103880 ~ 7104218 (-) True G86108
TU127575 other upstream 376806 7388236 ~ 7388910 (-) True G86203
TU128131 other upstream 1336732 8348162 ~ 8359980 (-) False cpped1
XR_006252260.1 other upstream 1506805 8518235 ~ 8518365 (-) True LOC122355888
XR_006252259.1 other upstream 1507550 8518980 ~ 8519109 (-) True LOC122355887

Expression Profile