RNA id: TU127438


Basic Information

Item Value
RNA id TU127438
length 339
RNA type TUCP
GC content 0.48
exon number 1
gene id G86108
representative True

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 7103880 ~ 7104218 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATCACCACTCACTACAGATTGTGAAAGCTTTATTGCGGAGATGAAGAGGGTTTTTCACCATCCAGCCAGTACAGGAGATGTGGATTATCGTTTGCTTCAGCTCTCTCAGGGCACTAGGAGTGTGGCAGAGTTTGCAATTGAGTTTCGCACACTAGCTTCAGAGAGTGGATGGAATCAGCAAGCTTTGAAGGCCACGTTCTACCAAGCATTGTCTCCCGAGCTTAAGGACGAGTTAGCATTTAGAGATCCTGCTCCAGATTTAGAATCTCTCATTGATATGTCTATCCGGGTAGATCATCGGCTCCGGGAGCGAAGGAATGAAAGACGTCGGGAGACCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU127428 lncRNA downstream 92450 7011203 ~ 7011430 (-) True G86098
TU127426 lncRNA downstream 94767 7007826 ~ 7009113 (-) True G86096
TU127422 lncRNA downstream 100949 7002260 ~ 7002931 (-) True G86094
XR_006252235.1 lncRNA downstream 101731 7001006 ~ 7002149 (-) False LOC122355669
XR_006252236.1 lncRNA downstream 101737 7001006 ~ 7002143 (-) True LOC122355669
TU127548 lncRNA upstream 179668 7283886 ~ 7285998 (-) True G86184
TU127551 lncRNA upstream 182192 7286410 ~ 7287752 (-) True G86185
TU127556 lncRNA upstream 184952 7289170 ~ 7290516 (-) True G86187
TU127554 lncRNA upstream 186510 7290728 ~ 7292120 (-) True G86186
TU127557 lncRNA upstream 193582 7297800 ~ 7298146 (-) True G86188
XM_043253679.1 mRNA downstream 823532 6197482 ~ 6280348 (-) False LOC122355417
XM_043253937.1 mRNA upstream 67178 7171396 ~ 7173368 (-) True hexim1
XM_043253936.1 mRNA upstream 70400 7174618 ~ 7182834 (-) False acbd4
XM_043253935.1 mRNA upstream 70400 7174618 ~ 7182834 (-) False acbd4
XM_043253933.1 mRNA upstream 70400 7174618 ~ 7182834 (-) False acbd4
XM_043253934.1 mRNA upstream 70400 7174618 ~ 7182834 (-) True acbd4
TU127372 other downstream 432633 6670319 ~ 6671247 (-) True G86049
XR_006252215.1 other downstream 1030448 6064298 ~ 6073432 (-) False LOC122355418
XR_006252216.1 other downstream 1049527 6051723 ~ 6054353 (-) False LOC122355418
TU127212 other downstream 1096773 5990913 ~ 6007107 (-) True G85930
TU127203 other downstream 1116100 5984989 ~ 5987780 (-) True G85925
TU127575 other upstream 284018 7388236 ~ 7388910 (-) True G86203
TU128131 other upstream 1243944 8348162 ~ 8359980 (-) False cpped1
XR_006252260.1 other upstream 1414017 8518235 ~ 8518365 (-) True LOC122355888
XR_006252259.1 other upstream 1414762 8518980 ~ 8519109 (-) True LOC122355887
TU128398 other upstream 1506334 8610552 ~ 8612445 (-) True G86783

Expression Profile