RNA id: TU127546


Basic Information

Item Value
RNA id TU127546
length 687
lncRNA type inter_gene
GC content 0.62
exon number 2
gene id G86183
representative False

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 7303134 ~ 7304848 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ggaggagccaacgacagacacagtgggcgtggcgtcaggcctcggagaggctttttattaacaaaaatagtacaaaataaagtgtccaaggggaaaagtgtccaaataaaaggggaaactggtgccctcgttgtgcttctgggattgtggaaggtcaggtagtgttccaggggggcagggtccaggtaaggggcggagtccggcggtcgcacgcgctcccctctcctgttcgggggcgcgaggggcggcggcttcttccgcggcatctccgtcgcttctttcctccggtcgtcagagatttaggggatttaacggctcggcatcctggcccgtcagccgtatccgggtgcagtcgtcgcctggactgtacggggtcccacgacgcgcttgtctagcggcgggacgagctccttcacgcacccttcctggacccacgaggacaccagcgtgcatgcacgggggaagagaccggtctcccgaggagaggcgcgcagggcatttaacggcggcggtgacaaggctaaatccccttcaggtgtgcctcgtcacacgccgccagacctggccgataccacgcccctcctctcgaacacacccactcccgtcgggagcctggtgaagggcggcgaataaaggacggggtgatggtgacaataaagaggaggggcagccgactcgtcacaatac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU127557 lncRNA downstream 4988 7297800 ~ 7298146 (-) True G86188
TU127554 lncRNA downstream 11014 7290728 ~ 7292120 (-) True G86186
TU127556 lncRNA downstream 12618 7289170 ~ 7290516 (-) True G86187
TU127551 lncRNA downstream 15382 7286410 ~ 7287752 (-) True G86185
TU127548 lncRNA downstream 17136 7283886 ~ 7285998 (-) True G86184
TU127570 lncRNA upstream 72050 7376898 ~ 7377195 (-) True G86199
TU127572 lncRNA upstream 75259 7380107 ~ 7385983 (-) True G86201
TU127590 lncRNA upstream 164179 7469027 ~ 7476130 (-) True G86216
TU127584 lncRNA upstream 175207 7480055 ~ 7487075 (-) True G86210
TU127605 lncRNA upstream 197729 7502577 ~ 7504461 (-) True G86230
XM_043253936.1 mRNA downstream 120300 7174618 ~ 7182834 (-) False acbd4
XM_043253935.1 mRNA downstream 120300 7174618 ~ 7182834 (-) False acbd4
XM_043253933.1 mRNA downstream 120300 7174618 ~ 7182834 (-) False acbd4
XM_043253934.1 mRNA downstream 120300 7174618 ~ 7182834 (-) True acbd4
XM_043253937.1 mRNA downstream 129766 7171396 ~ 7173368 (-) True hexim1
XM_043254022.1 mRNA upstream 54535 7359383 ~ 7365015 (-) True kcnj19b
XM_043254313.1 mRNA upstream 199868 7504716 ~ 7521406 (-) True hectd2
XM_043254236.1 mRNA upstream 222228 7527076 ~ 7538565 (-) False pcgf5b
XM_043254234.1 mRNA upstream 222228 7527076 ~ 7538563 (-) True pcgf5b
XM_043253178.1 mRNA upstream 247284 7552132 ~ 7554852 (-) True rpp30
TU127438 other downstream 198916 7103880 ~ 7104218 (-) True G86108
TU127372 other downstream 631887 6670319 ~ 6671247 (-) True G86049
XR_006252215.1 other downstream 1229702 6064298 ~ 6073432 (-) False LOC122355418
XR_006252216.1 other downstream 1248781 6051723 ~ 6054353 (-) False LOC122355418
TU127212 other downstream 1296027 5990913 ~ 6007107 (-) True G85930
TU127575 other upstream 83388 7388236 ~ 7388910 (-) True G86203
TU128131 other upstream 1043314 8348162 ~ 8359980 (-) False cpped1
XR_006252260.1 other upstream 1213387 8518235 ~ 8518365 (-) True LOC122355888
XR_006252259.1 other upstream 1214132 8518980 ~ 8519109 (-) True LOC122355887
TU128398 other upstream 1305704 8610552 ~ 8612445 (-) True G86783