RNA id: TU127609



Basic Information


Item Value
RNA id TU127609
length 338
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G86232
representative True

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 7522664 ~ 7523001 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


cagcttttaaaaaaaatgaccagtTACAACACTGTTAAACAACAGTAAAGAATGTTAAAAACACTTAGCTGTTGTGACTGTGGGGCGTTAAATAAAGACGTTTTTCCTCTTTCAAGCGAAAAGTGATTACTAGGAGAAAGGACAtttctgaaaacattacatataaagaaaacaacacatataaaaacagtattatggTGTTACCTATTGGTGTACAGTTTTGACAATGCTTGTGATGTCCGAAATGCCCTCAGATGTCCTCATCGATTAAGTAAAAGCTTGTTGAATACATATTAGTGAGTAGGACAACTGTCAAATCATattctttctatttaaat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU127605 lncRNA downstream 18203 7502577 ~ 7504461 (-) True G86230
TU127584 lncRNA downstream 35589 7480055 ~ 7487075 (-) True G86210
TU127590 lncRNA downstream 46534 7469027 ~ 7476130 (-) True G86216
TU127572 lncRNA downstream 136681 7380107 ~ 7385983 (-) True G86201
TU127570 lncRNA downstream 145469 7376898 ~ 7377195 (-) True G86199
TU127743 lncRNA upstream 65310 7588311 ~ 7590983 (-) True G86324
TU127746 lncRNA upstream 69800 7592801 ~ 7596998 (-) True G86325
TU127752 lncRNA upstream 92867 7615868 ~ 7617213 (-) True G86330
TU127757 lncRNA upstream 108395 7631396 ~ 7634556 (-) True G86334
TU127756 lncRNA upstream 111637 7634638 ~ 7636144 (-) True G86333
XM_043254313.1 mRNA downstream 1258 7504716 ~ 7521406 (-) True hectd2
XM_043254022.1 mRNA downstream 157649 7359383 ~ 7365015 (-) True kcnj19b
XM_043253936.1 mRNA downstream 339830 7174618 ~ 7182834 (-) False acbd4
XM_043254236.1 mRNA upstream 4075 7527076 ~ 7538565 (-) False pcgf5b
XM_043254234.1 mRNA upstream 4075 7527076 ~ 7538563 (-) True pcgf5b
XM_043253178.1 mRNA upstream 29131 7552132 ~ 7554852 (-) True rpp30
XM_043253276.1 mRNA upstream 50170 7573171 ~ 7578201 (-) True LOC122355224
XM_043254351.1 mRNA upstream 81852 7604853 ~ 7608716 (-) True LOC122355798
TU127575 other downstream 133754 7388236 ~ 7388910 (-) True G86203
TU127438 other downstream 418446 7103880 ~ 7104218 (-) True G86108
TU127372 other downstream 851417 6670319 ~ 6671247 (-) True G86049
XR_006252215.1 other downstream 1449232 6064298 ~ 6073432 (-) False LOC122355418
XR_006252216.1 other downstream 1468311 6051723 ~ 6054353 (-) False LOC122355418
TU128131 other upstream 825161 8348162 ~ 8359980 (-) False cpped1
XR_006252260.1 other upstream 995234 8518235 ~ 8518365 (-) True LOC122355888
XR_006252259.1 other upstream 995979 8518980 ~ 8519109 (-) True LOC122355887
TU128398 other upstream 1087551 8610552 ~ 8612445 (-) True G86783
XR_006252240.1 other upstream 1160051 8683052 ~ 8687548 (-) False plbd1b

Expression Profile