RNA id: TU127756



Basic Information


Item Value
RNA id TU127756
length 990
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G86333
representative True

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 7634638 ~ 7636144 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TATTGCAGAGCTTTATTCCTTCATGGAGTTATCATATGATATCCATACAGACTGCCTGAAAGCCGACATGCAGTTGTGTTACCTCGTAGCAATTTAACACAAAGGGGAGAATGAGCCCTGTTCCTCAACACCCTCTCCTCATCTCTGGATTCTCACTACCTCAAGGAATCTCCCAAATCTTTCATATTGGCAGCACAATCAAGCTTTTTAGCCCATTGGGAACAACACTATAATGTCATGACATAATTAAATCAGAACATTCAAACAGATGTGggcagtgcaaagacaaaacaatAGAGGGAAGTAAAGGGTACGTTCACAGTTTACAGGCTATGAAGCAATAACAGAATTAGGGGAGCAGGAGGGAGTTGGAGGTGTCTTTAGAAGCACTTGCGATGCACAATGGATGGCCCGGCCTCGTCATACTCCTGCTTGCTTATCCACATCTGCTGGAAGGTGGAGAGGGAGGCCAGGATGGAGCCACCAATCCATACTGAGTACTTGCGCTCAGGTGGGGCGATCTTGATCTTCATGGTGCTGGGGGCCAAAGCAGTGATCTCCTTCTGCATCCTGTCGGCAATGCCAGGGTACATGGTGGTACCACCAGACAACACATTGTTGGCGTAAAGGTCCTTACGGATGTCAATGTCGCATTTCATGATGCTGTTGTAAGTGGTTTCGTGGATGCCAGCAGATTCCATTCCTAACAATACGTGCAAATCAATGCATTAATACCATAGTGCTCTgaattcatcattttaaaatagaagcGAAGAAAGAGAAATGAGATATCACCGATGAAGGATGGCTGGAAGAGTGTCTCAGGGCAGCGGAACCTCTCATTGCCAATGGTGATGACCTGTCCATCAGGAAGCTCATAGCTCTTCTCCAGGGAGGAGGAAGAGGCTGCAGTGGCCATCTCATTCTCAAAATCCAGCGCCACATAACACAACTTCTCTTTGATGTCTCTGACAATTTCTCTTTCAGCTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU127757 lncRNA downstream 82 7631396 ~ 7634556 (-) True G86334
TU127752 lncRNA downstream 17425 7615868 ~ 7617213 (-) True G86330
TU127746 lncRNA downstream 37640 7592801 ~ 7596998 (-) True G86325
TU127743 lncRNA downstream 43655 7588311 ~ 7590983 (-) True G86324
TU127609 lncRNA downstream 111637 7522664 ~ 7523001 (-) True G86232
TU127781 lncRNA upstream 62521 7698665 ~ 7699014 (-) True G86354
TU127783 lncRNA upstream 69077 7705221 ~ 7705483 (-) True G86356
TU127784 lncRNA upstream 71716 7707860 ~ 7708194 (-) True G86357
TU127809 lncRNA upstream 210337 7846481 ~ 7846832 (-) True G86375
TU127862 lncRNA upstream 251822 7887966 ~ 7888246 (-) True G86412
XM_043253976.1 mRNA downstream 20271 7612135 ~ 7614367 (-) True ifit9
XM_043253979.1 mRNA downstream 22646 7609394 ~ 7611992 (-) True ifit10
XM_043254351.1 mRNA downstream 25922 7604853 ~ 7608716 (-) True LOC122355798
XM_043253276.1 mRNA downstream 56437 7573171 ~ 7578201 (-) True LOC122355224
XM_043253178.1 mRNA downstream 79786 7552132 ~ 7554852 (-) True rpp30
XM_043253706.1 mRNA upstream 699 7636843 ~ 7646791 (-) True stambpl1
XM_043253707.1 mRNA upstream 699 7636843 ~ 7646777 (-) False stambpl1
XM_043253709.1 mRNA upstream 15604 7651748 ~ 7662731 (-) True lipf
XM_043253708.1 mRNA upstream 15604 7651748 ~ 7662378 (-) False lipf
XM_043253670.1 mRNA upstream 84243 7720387 ~ 7735245 (-) False ptenb
TU127575 other downstream 245728 7388236 ~ 7388910 (-) True G86203
TU127438 other downstream 530420 7103880 ~ 7104218 (-) True G86108
TU127372 other downstream 963391 6670319 ~ 6671247 (-) True G86049
XR_006252215.1 other downstream 1561206 6064298 ~ 6073432 (-) False LOC122355418
XR_006252216.1 other downstream 1580285 6051723 ~ 6054353 (-) False LOC122355418
TU128131 other upstream 712018 8348162 ~ 8359980 (-) False cpped1
XR_006252260.1 other upstream 882091 8518235 ~ 8518365 (-) True LOC122355888
XR_006252259.1 other upstream 882836 8518980 ~ 8519109 (-) True LOC122355887
TU128398 other upstream 974408 8610552 ~ 8612445 (-) True G86783
XR_006252240.1 other upstream 1046908 8683052 ~ 8687548 (-) False plbd1b

Expression Profile