Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU128131 |
| length | 822 |
| RNA type | TUCP |
| GC content | 0.52 |
| exon number | 3 |
| gene id | cpped1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056710.1 |
| NCBI id | CM032079.1 |
| chromosome length | 20499150 |
| location | 8334404 ~ 8359992 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU128139 | lncRNA | downstream | 3553 | 8344336 ~ 8344609 (-) | True | G86608 |
| TU128137 | lncRNA | downstream | 8347 | 8339456 ~ 8339815 (-) | True | G86606 |
| TU128132 | lncRNA | downstream | 9462 | 8334407 ~ 8338700 (-) | False | cpped1 |
| TU128087 | lncRNA | downstream | 57752 | 8290080 ~ 8290410 (-) | True | G86576 |
| TU128056 | lncRNA | downstream | 149038 | 8198918 ~ 8199124 (-) | True | G86553 |
| TU128374 | lncRNA | upstream | 151655 | 8511635 ~ 8513245 (-) | True | LOC122355061 |
| TU128385 | lncRNA | upstream | 175993 | 8535973 ~ 8538206 (-) | True | G86775 |
| TU128416 | lncRNA | upstream | 237414 | 8597394 ~ 8628972 (-) | True | G86798 |
| TU128428 | lncRNA | upstream | 263317 | 8623297 ~ 8626329 (-) | True | G86807 |
| TU128431 | lncRNA | upstream | 267114 | 8627094 ~ 8630207 (-) | True | G86809 |
| XM_043253547.1 | mRNA | downstream | 16623 | 8325243 ~ 8331539 (-) | True | ercc4 |
| XM_043253545.1 | mRNA | downstream | 23121 | 8303767 ~ 8325041 (-) | True | mrtfba |
| XM_043253546.1 | mRNA | downstream | 29067 | 8303767 ~ 8319095 (-) | False | mrtfba |
| XM_043253549.1 | mRNA | downstream | 69997 | 8267774 ~ 8278165 (-) | True | mgrn1a |
| XM_043253548.1 | mRNA | downstream | 69998 | 8267774 ~ 8278164 (-) | False | mgrn1a |
| XM_043253993.1 | mRNA | upstream | 57252 | 8417232 ~ 8511214 (-) | False | snx29 |
| XM_043253992.1 | mRNA | upstream | 57252 | 8417232 ~ 8511213 (-) | True | snx29 |
| XM_043253994.1 | mRNA | upstream | 57252 | 8417232 ~ 8511212 (-) | False | snx29 |
| XM_043253017.1 | mRNA | upstream | 151423 | 8511403 ~ 8513265 (-) | False | LOC122355061 |
| XM_043253016.1 | mRNA | upstream | 151423 | 8511403 ~ 8513264 (-) | False | LOC122355061 |
| TU127575 | other | downstream | 959252 | 7388236 ~ 7388910 (-) | True | G86203 |
| TU127438 | other | downstream | 1243944 | 7103880 ~ 7104218 (-) | True | G86108 |
| TU127372 | other | downstream | 1676915 | 6670319 ~ 6671247 (-) | True | G86049 |
| XR_006252215.1 | other | downstream | 2274730 | 6064298 ~ 6073432 (-) | False | LOC122355418 |
| XR_006252216.1 | other | downstream | 2293809 | 6051723 ~ 6054353 (-) | False | LOC122355418 |
| XR_006252260.1 | other | upstream | 158255 | 8518235 ~ 8518365 (-) | True | LOC122355888 |
| XR_006252259.1 | other | upstream | 159000 | 8518980 ~ 8519109 (-) | True | LOC122355887 |
| TU128398 | other | upstream | 250572 | 8610552 ~ 8612445 (-) | True | G86783 |
| XR_006252240.1 | other | upstream | 323072 | 8683052 ~ 8687548 (-) | False | plbd1b |
| unassigned_transcript_1920 | other | upstream | 327518 | 8687498 ~ 8687570 (-) | True | trnar-ccu_66 |
