RNA id: TU128458



Basic Information


Item Value
RNA id TU128458
length 370
lncRNA type read_through
GC content 0.43
exon number 2
gene id G86826
representative True

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 8680105 ~ 8744645 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATCAAGGGACTCAGCTGACGGGCCAGTCCTTTTGACAGGTCATAAATGTGCAACTTCACGTTGAAAGAACTTCCATCAGCCATCGCTACGGCTTTAGACGAACGCgtgtttacaaacaaaaacGCAACTCTACAGCTAGCAAACTGAAACTTAGCTTGAGCTTCTGGCTCTGACTGAACTCGGAAAACAAGACTTCGGTGTATTGGCGGATCACATTTCCATCATCGCAGTAAATATTAGTACAAGGAACGCATTCGTTGTCGTTTTAAATGATTTcggaaaaataataaaccacGGGTTGTTGACAAATCCAACGCAGCGTTCACGTCCTCCCCGTCACAGTGACACAGGGATtttttttttttttttt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU128431 lncRNA downstream 49898 8627094 ~ 8630207 (-) True G86809
TU128416 lncRNA downstream 51133 8597394 ~ 8628972 (-) True G86798
TU128428 lncRNA downstream 53776 8623297 ~ 8626329 (-) True G86807
TU128385 lncRNA downstream 141899 8535973 ~ 8538206 (-) True G86775
TU128374 lncRNA downstream 166860 8511635 ~ 8513245 (-) True LOC122355061
TU128502 lncRNA upstream 77235 8821880 ~ 8823436 (-) True G86848
TU128508 lncRNA upstream 93706 8838351 ~ 8838612 (-) True G86852
TU128509 lncRNA upstream 96169 8840814 ~ 8841155 (-) True G86853
TU128510 lncRNA upstream 98742 8843387 ~ 8843774 (-) True G86854
TU128514 lncRNA upstream 108300 8852945 ~ 8853257 (-) True G86856
XM_043254240.1 mRNA downstream 41222 8637411 ~ 8638883 (-) True LOC122355697
XM_043254241.1 mRNA downstream 43193 8634892 ~ 8636912 (-) True LOC122355698
XM_043254454.1 mRNA downstream 67644 8611249 ~ 8612461 (-) True cby1
XM_043254453.1 mRNA downstream 68881 8606637 ~ 8611224 (-) True slc16a8
XM_043254384.1 mRNA downstream 73967 8602210 ~ 8606138 (-) True pdap1a
XM_043253311.1 mRNA upstream 37034 8781679 ~ 8808640 (-) True mrtfab
XM_043253320.1 mRNA upstream 64437 8809082 ~ 8821061 (-) False rgs9b
XM_043253321.1 mRNA upstream 65523 8810168 ~ 8821062 (-) True rgs9b
XM_043253341.1 mRNA upstream 87437 8832082 ~ 8837257 (-) True LOC122355256
XM_043253342.1 mRNA upstream 87437 8832082 ~ 8837220 (-) False LOC122355256
TU128398 other downstream 67660 8610552 ~ 8612445 (-) True G86783
XR_006252259.1 other downstream 160996 8518980 ~ 8519109 (-) True LOC122355887
XR_006252260.1 other downstream 161740 8518235 ~ 8518365 (-) True LOC122355888
TU128131 other downstream 320125 8348162 ~ 8359980 (-) False cpped1
TU127575 other downstream 1291195 7388236 ~ 7388910 (-) True G86203
TU128530 other upstream 130972 8875617 ~ 8878112 (-) True LOC122355288
TU128628 other upstream 736914 9481559 ~ 9489290 (-) False ormdl3
TU128627 other upstream 736985 9481630 ~ 9489290 (-) False ormdl3
XR_006252200.1 other upstream 740301 9484946 ~ 9489312 (-) False ormdl3
XR_006252199.1 other upstream 740301 9484946 ~ 9489312 (-) False ormdl3

Expression Profile