RNA id: TU128515



Basic Information


Item Value
RNA id TU128515
length 213
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G86857
representative True

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 8855329 ~ 8855541 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGACAATCTGAAAGTTTTTCACAGATGCCTGAGTAACTCGGCCATGAAAATTCAGCACATATGACTGAGTTTGCTCATTCCAGCTGGGTGATTTATTTACAAGGGTGACGAGATTCTCTTTGTTTCCATTCTCATATCGAGTGAGCAGAGATTCCAGCTCCTGGGACATGCAAAAGAGATCTCATTTACATTATTCATACGTacatagaaaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU128514 lncRNA downstream 2072 8852945 ~ 8853257 (-) True G86856
TU128510 lncRNA downstream 11555 8843387 ~ 8843774 (-) True G86854
TU128509 lncRNA downstream 14174 8840814 ~ 8841155 (-) True G86853
TU128508 lncRNA downstream 16717 8838351 ~ 8838612 (-) True G86852
TU128502 lncRNA downstream 31893 8821880 ~ 8823436 (-) True G86848
TU128518 lncRNA upstream 132 8855673 ~ 8856110 (-) True G86858
TU128525 lncRNA upstream 7900 8863441 ~ 8864263 (-) True G86862
TU128523 lncRNA upstream 12351 8867892 ~ 8869062 (-) True G86861
TU128593 lncRNA upstream 444138 9299679 ~ 9299899 (-) True G86916
TU128616 lncRNA upstream 456130 9311671 ~ 9313698 (-) False thrab
XM_043253325.1 mRNA downstream 3095 8845114 ~ 8852234 (-) False snx11
XM_043253324.1 mRNA downstream 3095 8845115 ~ 8852234 (-) True snx11
XM_043253323.1 mRNA downstream 4732 8845111 ~ 8850597 (-) False snx11
XM_043253341.1 mRNA downstream 18072 8832082 ~ 8837257 (-) True LOC122355256
XM_043253372.1 mRNA upstream 14524 8870065 ~ 8872539 (-) True snf8
XM_043253391.1 mRNA upstream 20132 8875673 ~ 8878131 (-) False LOC122355288
XM_043253380.1 mRNA upstream 87570 8943111 ~ 8946818 (-) False nme2a
XM_043253379.1 mRNA upstream 87570 8943111 ~ 8946320 (-) True nme2a
XM_043253326.1 mRNA upstream 418824 9274365 ~ 9281289 (-) True eme1
unassigned_transcript_1920 other downstream 167759 8687498 ~ 8687570 (-) True trnar-ccu_66
XR_006252240.1 other downstream 167781 8683052 ~ 8687548 (-) False plbd1b
TU128398 other downstream 242884 8610552 ~ 8612445 (-) True G86783
XR_006252259.1 other downstream 336220 8518980 ~ 8519109 (-) True LOC122355887
XR_006252260.1 other downstream 336964 8518235 ~ 8518365 (-) True LOC122355888
TU128530 other upstream 20076 8875617 ~ 8878112 (-) True LOC122355288
TU128628 other upstream 626018 9481559 ~ 9489290 (-) False ormdl3
TU128627 other upstream 626089 9481630 ~ 9489290 (-) False ormdl3
XR_006252200.1 other upstream 629405 9484946 ~ 9489312 (-) False ormdl3
XR_006252199.1 other upstream 629405 9484946 ~ 9489312 (-) False ormdl3

Expression Profile