RNA id: TU128819



Basic Information


Item Value
RNA id TU128819
length 665
RNA type TUCP
GC content 0.49
exon number 6
gene id LOC122355252
representative False

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 9864814 ~ 9874515 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gttCAAAAATCAGGCGGAACGCAGCTGAAGTTGGTGATGTCATTTCCTAATTATGGGCAGGCGCTCTTCAAGCCCATGAAACAGGAACGGCATGAGGAGACCAATGTGAATCTGTACTACTTTTCTGATTTTGAACGGCATAATGCTGAGATCGCAGCCTTCCACTTAGACAGGATTCTGGGTTTCAGAAGGGTGCCTCCGGTGGTTGGGAGGCTCATTAATGTGATAAAAGAGATCAAAGACATCACCACCGACCATAAACTGGTCACAACATTTTTCACTTCTCCAGTGGggaatgcatgtttttatggcCAGTGTTCCTATTACTGCTCCACAGAGCATGCTATCTGTGGTCGTCCCCTCAAGGTAGAGGGATCTATGGCTGCTATGTTGCCAGACCCGAGTTTGGCACCACGTCGCTCGTGGAGGAGTCCCTGGAGACGGTCCTACAGCCGAAGCAAGCTGGCTCAATGGGAGACAGACTCCAACTACTGTGACTCCATAAAAAAGACTCCTCCCTATGACCGAGGCACTCGATTGGTGGATCTGATCGACATGAGCATTCTGGACTTTCTAATGAGTAACATGGACAGGCACCACTATGAAACGTTTGAGAAATTTGGCAATGACACGTTTCTCGTACACTTAGACAACGGAAGGGCGTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU128727 lncRNA upstream 104436 9764132 ~ 9767228 (+) False LOC122355274
TU128675 lncRNA upstream 207525 9661227 ~ 9664139 (+) False mfsd8
TU128677 lncRNA upstream 207525 9661227 ~ 9664139 (+) False mfsd8
TU128698 lncRNA upstream 216387 9654959 ~ 9655277 (+) True G86984
TU128693 lncRNA upstream 249312 9619995 ~ 9622352 (+) False G86981
TU128830 lncRNA downstream 20855 9894750 ~ 9895975 (+) False LOC122355255
TU128848 lncRNA downstream 85843 9959738 ~ 9959969 (+) True G87094
TU128849 lncRNA downstream 86752 9960647 ~ 9960958 (+) True G87095
TU128850 lncRNA downstream 204573 10078468 ~ 10097980 (+) True LOC122355662
XR_006252232.1 lncRNA downstream 204763 10078658 ~ 10098941 (+) False LOC122355662
XM_043253381.1 mRNA upstream 90994 9774372 ~ 9780670 (+) True LOC122355282
XM_043253369.1 mRNA upstream 105000 9757247 ~ 9766664 (+) True LOC122355274
XM_043253376.1 mRNA upstream 198350 9671521 ~ 9673314 (+) True LOC122355279
XM_043253377.1 mRNA upstream 198350 9671521 ~ 9673314 (+) False LOC122355279
XM_043253345.1 mRNA upstream 202562 9665352 ~ 9669102 (+) True si:dkey-219e21.4
XM_043253346.1 mRNA downstream 3721 9877616 ~ 9881012 (+) True LOC122355261
XM_043253347.1 mRNA downstream 3721 9877616 ~ 9881012 (+) False LOC122355261
XM_043253338.1 mRNA downstream 9138 9883033 ~ 9899001 (+) False LOC122355255
XM_043253337.1 mRNA downstream 9138 9883033 ~ 9899001 (+) False LOC122355255
XM_043253333.1 mRNA downstream 9138 9883033 ~ 9896533 (+) False LOC122355255
TU128728 other upstream 112203 9757273 ~ 9759461 (+) False LOC122355274
XR_006252198.1 other upstream 1019215 8836448 ~ 8852449 (+) False arsg
unassigned_transcript_1921 other upstream 1166333 8705260 ~ 8705331 (+) True trnaq-cug_20
TU127672 other upstream 2027581 7815823 ~ 7844083 (+) False LOC122355675
TU127500 other upstream 2563435 7307924 ~ 7308229 (+) True G86143
TU128881 other downstream 607720 10481615 ~ 10487341 (+) False LOC122355192
TU128882 other downstream 613725 10487620 ~ 10491172 (+) False LOC122355192
XR_006252209.1 other downstream 668334 10542229 ~ 10581755 (+) False svila
XR_006252210.1 other downstream 668334 10542229 ~ 10579996 (+) False svila
unassigned_transcript_1922 other downstream 1210382 11084277 ~ 11084370 (+) True trnai-uau_3

Expression Profile