RNA id: TU128925



Basic Information


Item Value
RNA id TU128925
length 702
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G87125
representative False

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 10578754 ~ 10582536 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTTCTCTGTGATCTCAGCGATGTCCTCTCTGTGTTCCCAGCTGGGAAACATGTTAGTGAAAGTTAGAGGCTCAAGTCCTGCGTGGATTAGATATGATTTTGGAGTGTTCTTCTcattttttcCTTTGCTATATTGGAGTACTGTTTCCATGGCACACTTCCTGTCAGAGTCCCATCGTATGCGAGCTGATCCAGTGCTCTCACTGTCCTGAGGCCACCAGCCCTGCCATAGGTACACTTCATGGTGATTATCCACCAAAAACAGGGCTAAAAGAAACGATCAGAGACATCATGACACTGCCACagacattatcattattattcaatGAGTGCGAAGAATCGAATTTCCTTACATACATTATGCATGTAATAAGTGTAGAAAAGCCTAATTAAAGTGTAACTGACTCCCATCCAGAATACCTAACAGTGCAAGTTAACAAGTTACATCAGACAGCACTCTTAACAGTGTTTAGTGAACATGAATATGTCAAGCACCTGGCTGAGTAGCTGTATACAAATCCTCCTGTAGGAAAGGCATTGAGTTGACCAAATTTGGTTCCCTGGATGGATACACAAACTCCACGGCCACAAACTCTCCTGAAGCGCTGCTTAACTGGAACAGCCGGGGAGTGAAGTTGAACTTTCCCGGATCTGAGCAAAATGTCAAATCACGAatcaaaagtatgtttttaagacacgtaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU128879 lncRNA downstream 133976 10409339 ~ 10444778 (-) False LOC122355705
XR_006252238.1 lncRNA downstream 133979 10412331 ~ 10444775 (-) True LOC122355705
TU128874 lncRNA downstream 217340 10360877 ~ 10361414 (-) True G87104
TU128838 lncRNA downstream 638905 9920187 ~ 9939849 (-) False thrab
TU128795 lncRNA downstream 811516 9763102 ~ 9767238 (-) True G87055
TU128985 lncRNA upstream 25462 10605232 ~ 10606019 (-) True G87164
TU129332 lncRNA upstream 213293 10793063 ~ 10804738 (-) True G87388
TU129314 lncRNA upstream 236791 10816561 ~ 10864596 (-) False G87376
TU129316 lncRNA upstream 238188 10817958 ~ 10864596 (-) True G87376
XR_006252171.1 lncRNA upstream 289078 10868848 ~ 10894717 (-) True LOC122355137
XM_043254356.1 mRNA downstream 434025 10138438 ~ 10144729 (-) True LOC122355804
XM_043253390.1 mRNA downstream 773244 9788025 ~ 9805510 (-) True LOC122355287
XM_043253367.1 mRNA downstream 822707 9743392 ~ 9756047 (-) False LOC122355272
XM_043253366.1 mRNA downstream 822707 9743392 ~ 9756047 (-) True LOC122355272
XM_043253392.1 mRNA downstream 838226 9734537 ~ 9740528 (-) True LOC122355289
XM_043253136.1 mRNA upstream 30878 10610648 ~ 10613502 (-) True chac2
XM_043253419.1 mRNA upstream 320483 10900253 ~ 10915884 (-) False foxn2b
XM_043253418.1 mRNA upstream 320483 10900253 ~ 10915883 (-) True foxn2b
XM_043253414.1 mRNA upstream 339009 10918779 ~ 10931157 (-) False fbxo11b
XM_043253416.1 mRNA upstream 339009 10918779 ~ 10931157 (-) False fbxo11b
XR_006252200.1 other downstream 1089442 9484946 ~ 9489312 (-) False ormdl3
XR_006252199.1 other downstream 1089442 9484946 ~ 9489312 (-) False ormdl3
TU128628 other downstream 1089464 9481559 ~ 9489290 (-) False ormdl3
TU128627 other downstream 1089464 9481630 ~ 9489290 (-) False ormdl3
TU128530 other downstream 1700642 8875617 ~ 8878112 (-) True LOC122355288
TU129388 other upstream 463118 11042888 ~ 11045882 (-) True LOC122355648
TU129464 other upstream 741653 11321423 ~ 11322603 (-) True G87489
TU129586 other upstream 1253109 11832879 ~ 11835612 (-) True G87569
TU129639 other upstream 1369501 11949271 ~ 11951155 (-) False G87608
TU129915 other upstream 2069613 12649383 ~ 12675472 (-) False prr15lb

Expression Profile