Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU129370 |
| length | 884 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G87417 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056710.1 |
| NCBI id | CM032079.1 |
| chromosome length | 20499150 |
| location | 11312472 ~ 11315998 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0042594 | response to starvation | biological_process |
| GO:0031667 | response to nutrient levels | biological_process |
| GO:0009991 | response to extracellular stimulus | biological_process |
| id | description |
|---|---|
| ko00053 | Ascorbate and aldarate metabolism |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU129359 | lncRNA | downstream | 13938 | 11259017 ~ 11298534 (-) | True | G87409 |
| TU129457 | lncRNA | downstream | 28886 | 11278324 ~ 11283586 (-) | True | G87484 |
| TU129458 | lncRNA | downstream | 28886 | 11278324 ~ 11283586 (-) | False | G87484 |
| TU129455 | lncRNA | downstream | 39170 | 11271741 ~ 11273302 (-) | True | G87482 |
| TU129411 | lncRNA | downstream | 147433 | 11108896 ~ 11165039 (-) | True | G87449 |
| TU129367 | lncRNA | upstream | 385 | 11316383 ~ 11318921 (-) | True | G87414 |
| TU129509 | lncRNA | upstream | 263190 | 11579188 ~ 11580353 (-) | False | LOC122355534 |
| XR_006252227.1 | lncRNA | upstream | 263223 | 11579221 ~ 11580359 (-) | True | LOC122355534 |
| TU129560 | lncRNA | upstream | 437051 | 11753049 ~ 11790926 (-) | True | G87547 |
| TU129564 | lncRNA | upstream | 483007 | 11799005 ~ 11799343 (-) | True | G87551 |
| XM_043253246.1 | mRNA | downstream | 92920 | 11217292 ~ 11219552 (-) | True | six2b |
| XM_043254109.1 | mRNA | downstream | 189634 | 11119418 ~ 11122838 (-) | True | zfp36l2 |
| XM_043253869.1 | mRNA | downstream | 228436 | 11082205 ~ 11084036 (-) | True | hcar1-4 |
| XM_043254162.1 | mRNA | downstream | 257666 | 11049679 ~ 11054806 (-) | True | kcng3 |
| XM_043254472.1 | mRNA | upstream | 8403 | 11324401 ~ 11331793 (-) | True | sncgb |
| XM_043254473.1 | mRNA | upstream | 8403 | 11324401 ~ 11331786 (-) | False | sncgb |
| XM_043253747.1 | mRNA | upstream | 28461 | 11344459 ~ 11374806 (-) | False | bmpr1ab |
| XM_043253748.1 | mRNA | upstream | 28461 | 11344459 ~ 11374806 (-) | True | bmpr1ab |
| XM_043254262.1 | mRNA | upstream | 59797 | 11375795 ~ 11392390 (-) | True | ldb3b |
| TU129388 | other | downstream | 266590 | 11042888 ~ 11045882 (-) | True | LOC122355648 |
| XR_006252200.1 | other | downstream | 1823160 | 9484946 ~ 9489312 (-) | False | ormdl3 |
| XR_006252199.1 | other | downstream | 1823160 | 9484946 ~ 9489312 (-) | False | ormdl3 |
| TU128628 | other | downstream | 1823182 | 9481559 ~ 9489290 (-) | False | ormdl3 |
| TU129464 | other | upstream | 5425 | 11321423 ~ 11322603 (-) | True | G87489 |
| TU129586 | other | upstream | 516881 | 11832879 ~ 11835612 (-) | True | G87569 |
| TU129639 | other | upstream | 633273 | 11949271 ~ 11951155 (-) | False | G87608 |
| TU129915 | other | upstream | 1333385 | 12649383 ~ 12675472 (-) | False | prr15lb |
| TU129914 | other | upstream | 1354627 | 12670625 ~ 12675472 (-) | False | prr15lb |
