RNA id: TU129629



Basic Information


Item Value
RNA id TU129629
length 355
lncRNA type inter_gene
GC content 0.37
exon number 2
gene id G87603
representative True

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 11937041 ~ 11937682 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


tgatatttcattttttttgtttataacaaTAACTACTTTGCCGACTGCTGTCaaactttttcttaaaaatgcaatccaggttaaattatgaaatcacagatattcaaaatgatataaactcaaaatcattattatttacctCCTCGTTTTCCTCGTCAAAATATTTCACTTGAAAATGGCTCAAACCGAATGTAGTTTTAATCTGGAAATTAAACGTTTTATACCCCCCGGTTAAGGTTTGTTTATGTAGGCCTCAGCTACGGCCTTCCAGGACCAAGAAATGTAAACGTCCCCACAGAAACGCCACCCAGCAAGGCTTAATGACTCCTTACCCAGGCCTCCACAGTCTCCCACT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU129616 lncRNA downstream 42529 11890934 ~ 11894512 (-) True G87593
TU129565 lncRNA downstream 136560 11799592 ~ 11800481 (-) True G87552
TU129564 lncRNA downstream 137698 11799005 ~ 11799343 (-) True G87551
TU129560 lncRNA downstream 146115 11753049 ~ 11790926 (-) True G87547
XR_006252227.1 lncRNA downstream 356682 11579221 ~ 11580359 (-) True LOC122355534
TU129631 lncRNA upstream 6390 11944072 ~ 11945631 (-) True G87605
TU129635 lncRNA upstream 9225 11946907 ~ 11947734 (-) True G87607
TU129647 lncRNA upstream 10858 11948540 ~ 11950995 (-) True G87608
TU129640 lncRNA upstream 11589 11949271 ~ 11950995 (-) False G87608
TU129650 lncRNA upstream 32847 11970529 ~ 11970824 (-) True G87610
XM_043254010.1 mRNA downstream 585 11932423 ~ 11936456 (-) True psme3
XM_043253494.1 mRNA downstream 113773 11820541 ~ 11823268 (-) True chmp2a
XM_043253554.1 mRNA downstream 195080 11685789 ~ 11741961 (-) False zeb1b
XM_043253672.1 mRNA upstream 166196 12103878 ~ 12112775 (-) True dhx8
XM_043254114.1 mRNA upstream 510354 12448036 ~ 12472207 (-) False uts2r2
XM_043254112.1 mRNA upstream 517174 12454856 ~ 12472207 (-) False uts2r2
XM_043254113.1 mRNA upstream 517174 12454856 ~ 12472207 (-) True uts2r2
XM_043254115.1 mRNA upstream 526512 12464194 ~ 12472207 (-) False uts2r2
TU129586 other downstream 101429 11832879 ~ 11835612 (-) True G87569
TU129464 other downstream 614438 11321423 ~ 11322603 (-) True G87489
TU129388 other downstream 891159 11042888 ~ 11045882 (-) True LOC122355648
XR_006252200.1 other downstream 2447729 9484946 ~ 9489312 (-) False ormdl3
TU129639 other upstream 11589 11949271 ~ 11951155 (-) False G87608
TU129915 other upstream 711701 12649383 ~ 12675472 (-) False prr15lb
TU129914 other upstream 732943 12670625 ~ 12675472 (-) False prr15lb
TU130001 other upstream 814222 12751904 ~ 12752678 (-) True G87845
XR_006252221.1 other upstream 1674052 13611734 ~ 13691339 (-) False tcf7l2

Expression Profile