Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU129635 |
| length | 727 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G87607 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056710.1 |
| NCBI id | CM032079.1 |
| chromosome length | 20499150 |
| location | 11946907 ~ 11947734 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0005768 | endosome | cellular_component |
| GO:0044433 | obsolete cytoplasmic vesicle part | cellular_component |
| GO:0044440 | obsolete endosomal part | cellular_component |
| GO:0010008 | endosome membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU129631 | lncRNA | downstream | 1276 | 11944072 ~ 11945631 (-) | True | G87605 |
| TU129629 | lncRNA | downstream | 9225 | 11937041 ~ 11937682 (-) | True | G87603 |
| TU129616 | lncRNA | downstream | 52395 | 11890934 ~ 11894512 (-) | True | G87593 |
| TU129565 | lncRNA | downstream | 146426 | 11799592 ~ 11800481 (-) | True | G87552 |
| TU129564 | lncRNA | downstream | 147564 | 11799005 ~ 11799343 (-) | True | G87551 |
| TU129647 | lncRNA | upstream | 806 | 11948540 ~ 11950995 (-) | True | G87608 |
| TU129640 | lncRNA | upstream | 1537 | 11949271 ~ 11950995 (-) | False | G87608 |
| TU129650 | lncRNA | upstream | 22795 | 11970529 ~ 11970824 (-) | True | G87610 |
| TU129705 | lncRNA | upstream | 203565 | 12151299 ~ 12151635 (-) | True | G87659 |
| TU129706 | lncRNA | upstream | 204506 | 12152240 ~ 12152737 (-) | True | G87660 |
| XM_043254010.1 | mRNA | downstream | 10451 | 11932423 ~ 11936456 (-) | True | psme3 |
| XM_043253494.1 | mRNA | downstream | 123639 | 11820541 ~ 11823268 (-) | True | chmp2a |
| XM_043253556.1 | mRNA | downstream | 206351 | 11685789 ~ 11740556 (-) | True | zeb1b |
| XM_043253672.1 | mRNA | upstream | 156144 | 12103878 ~ 12112775 (-) | True | dhx8 |
| XM_043254114.1 | mRNA | upstream | 500302 | 12448036 ~ 12472207 (-) | False | uts2r2 |
| XM_043254112.1 | mRNA | upstream | 507122 | 12454856 ~ 12472207 (-) | False | uts2r2 |
| XM_043254113.1 | mRNA | upstream | 507122 | 12454856 ~ 12472207 (-) | True | uts2r2 |
| XM_043254115.1 | mRNA | upstream | 516460 | 12464194 ~ 12472207 (-) | False | uts2r2 |
| TU129586 | other | downstream | 111295 | 11832879 ~ 11835612 (-) | True | G87569 |
| TU129464 | other | downstream | 624304 | 11321423 ~ 11322603 (-) | True | G87489 |
| TU129388 | other | downstream | 901025 | 11042888 ~ 11045882 (-) | True | LOC122355648 |
| XR_006252200.1 | other | downstream | 2457595 | 9484946 ~ 9489312 (-) | False | ormdl3 |
| TU129639 | other | upstream | 1537 | 11949271 ~ 11951155 (-) | False | G87608 |
| TU129915 | other | upstream | 701649 | 12649383 ~ 12675472 (-) | False | prr15lb |
| TU129914 | other | upstream | 722891 | 12670625 ~ 12675472 (-) | False | prr15lb |
| TU130001 | other | upstream | 804170 | 12751904 ~ 12752678 (-) | True | G87845 |
| XR_006252221.1 | other | upstream | 1664000 | 13611734 ~ 13691339 (-) | False | tcf7l2 |
