Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00009743 |
| length | 1342 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 6 |
| gene id | XLOC_004980 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007123.7 |
| NCBI id | CM002896.2 |
| chromosome length | 49182954 |
| location | 46841918 ~ 46868634 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006166 | purine ribonucleoside salvage | biological_process |
| GO:0016310 | phosphorylation | biological_process |
| GO:0005829 | cytosol | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0016740 | transferase activity | molecular_function |
| GO:0016773 | phosphotransferase activity, alcohol group as acceptor | molecular_function |
| GO:0004001 | adenosine kinase activity | molecular_function |
| GO:0016301 | kinase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-948 | Predicted to enable adenosine kinase activity. Predicted to be involved in AMP salvage. Predicted to act upstream of or within phosphorylation and purine ribonucleoside salvage. Predicted to be active in cytosol and nucleus. Is expressed in several structures, including alar plate midbrain region; liver; midbrain; musculature system; and segmental plate. Human ortholog(s) of this gene implicated in hypermethioninemia due to adenosine kinase deficiency. Orthologous to human ADK (adenosine kinase). |
| ensembl_id | ENSDART00000148670 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00009729 | lncRNA | upstream | 161593 | 46683212 ~ 46693443 (+) | True | XLOC_004976 |
| TCONS_00010774 | lncRNA | upstream | 311847 | 46542671 ~ 46543189 (+) | True | XLOC_004970 |
| TCONS_00011035 | lncRNA | upstream | 623165 | 46188296 ~ 46231871 (+) | True | XLOC_004963 |
| TCONS_00011034 | lncRNA | upstream | 752616 | 46078647 ~ 46102420 (+) | True | XLOC_004962 |
| TCONS_00010772 | lncRNA | upstream | 800840 | 46046285 ~ 46054196 (+) | True | XLOC_004961 |
| TCONS_00010775 | lncRNA | downstream | 167715 | 47035721 ~ 47036420 (+) | True | XLOC_004984 |
| TCONS_00011036 | lncRNA | downstream | 712016 | 47580022 ~ 47580566 (+) | True | XLOC_004991 |
| TCONS_00010776 | lncRNA | downstream | 738865 | 47606871 ~ 47610330 (+) | False | XLOC_004992 |
| TCONS_00010777 | lncRNA | downstream | 740333 | 47608339 ~ 47610330 (+) | True | XLOC_004992 |
| TCONS_00011038 | lncRNA | downstream | 1460860 | 48328866 ~ 48330894 (+) | False | XLOC_005002 |
| TCONS_00009741 | mRNA | upstream | 19096 | 46791907 ~ 46835940 (+) | True | XLOC_004979 |
| TCONS_00009739 | mRNA | upstream | 88736 | 46742805 ~ 46766300 (+) | False | XLOC_004978 |
| TCONS_00009740 | mRNA | upstream | 91212 | 46745239 ~ 46763824 (+) | True | XLOC_004978 |
| TCONS_00009738 | mRNA | upstream | 91216 | 46740584 ~ 46763820 (+) | False | XLOC_004978 |
| TCONS_00009737 | mRNA | upstream | 142098 | 46708920 ~ 46712938 (+) | True | XLOC_004977 |
| TCONS_00009744 | mRNA | downstream | 1265 | 46869271 ~ 46881002 (+) | True | XLOC_004981 |
| TCONS_00009745 | mRNA | downstream | 15779 | 46883785 ~ 46937956 (+) | False | XLOC_004982 |
| TCONS_00009748 | mRNA | downstream | 92573 | 46960579 ~ 46985891 (+) | False | XLOC_004983 |
| TCONS_00009749 | mRNA | downstream | 99783 | 46967789 ~ 47042081 (+) | True | XLOC_004983 |
| TCONS_00009750 | mRNA | downstream | 176701 | 47044707 ~ 47072007 (+) | False | XLOC_004985 |
| TCONS_00009724 | other | upstream | 251481 | 46603441 ~ 46603555 (+) | True | XLOC_004973 |
| TCONS_00009703 | other | upstream | 2228029 | 44626890 ~ 44627007 (+) | True | XLOC_004951 |
| TCONS_00009686 | other | upstream | 5394402 | 41460518 ~ 41460634 (+) | True | XLOC_004935 |
| TCONS_00009675 | other | upstream | 6443354 | 40411566 ~ 40411682 (+) | True | XLOC_004927 |
| TCONS_00009671 | other | upstream | 7351358 | 39503564 ~ 39503678 (+) | True | XLOC_004924 |
| TCONS_00009746 | other | downstream | 15838 | 46883844 ~ 46937955 (+) | False | XLOC_004982 |
| TCONS_00009747 | other | downstream | 47365 | 46915371 ~ 46937946 (+) | True | XLOC_004982 |
| TCONS_00009795 | other | downstream | 1948154 | 48816160 ~ 48825502 (+) | False | XLOC_005016 |
