RNA id: XM_043253077.1


Basic Information

Item Value
RNA id XM_043253077.1
length 3000
RNA type mRNA
GC content 0.43
exon number 1
gene id adrb1
representative True

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 13372489 ~ 13375488 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gtgAGCGCGTGCGGGCGCTGGGCTGGACAGCAAAGCGCGGATGGAAGCGCTCCACACCGGACCTGAAGTTCTGAATGAACGCGCTTCATTTCTCCACACCATGGGAGACGGTTTACCGTCCGTAAACTACAGCAATGACTCTAAACGCGGCACGGTGGATCTTAACTTATCAGAACAGTGGCTCGTGGGCATGGGAATCATCATGGGTCTGATAGTGTTCATCATTGTAGTGGGAAATATACTGGTTATAGTCGCCATAGCGCGGAATCAGAGGCTCCAGACGCTCACCAATGTTTTCATCGTGTCTCTGGCGTGCGCAGATCTCATCATGGGGTTACTGGTAGTGCCATTTGGCGCAGCCTTGGAGGTTAGAGGAGCCTGGATGTATGGGTCGTTCTTCTGTGAATTCTGGATATCTCTTGATGTACTTTGCGTCACGGCGAGCATCGAGACCCTGTGCGTAATTGCAATAGACAGGTATATCGCCATCATCTCTCCATTTCGCTATCAGAGTCTATTGACGAAAGCGCGAGCCAAGGTGGTGGTTTGCGGAGTGTGGGCTATATCGGCTCTGGTGTCGTTTCCACCCATCCTGATGCACTGGTCCCGGGACAGCGAGGAGACCGAGTGCTATGACAATCCCGAGTGCTGCGACTTCATCACCAATCGCGCATATGCCATCTCCTCCTCTATTATATCGTTTTACATCCCTTTAATAGTCATGATCTTCGTATATGCCAGAGTGTACAGAGAAGCCAAACAACAGCTGAACAAGATCAACAAATGTGAGGGAAGGTTCTACAACAATCATGGTACTAATTGCAAACCTAACCGAAAACGAACCACCAAGATCCTGGCTTTAAAAGAGCAGAAGGCGCTGAAAACGTTGGGAATTATCATGGGAACGTTCACGCTCTGCTGGCTGCCGTTCTTTATCGTTAACGTGGTGCGCGTGTTTTGCGCGCAAGTGGTGGATAAGGAGCTCTTCGTGTTTTTGAACTGGCTAGGGTACGTAAACTCCGCCTTTAACCCCATCATATACTGTCGGAGTCCCGACTTCAGGAAAGCCTTCAAGAGGCTGTTGTGTTGTCCGAGGCAGGCGGACCGCCGGCTGCACGTGAGCTCGTGCGATCTGTCGCGCTGCGCCGGGGGCTTCGGGAACTCAATGGAGCAGAGCATGCTCGGGACGTGGTCGGACTGCAACGGCGCGGACAGCAGCGACTGCAGTCTGGAGAGAAACGGCAGGATGTCCCATTCGGAGTCCCAACTGTAAAAGTACAACCGTTGCTATTTAATCGATATTACGCGAGCAAGAGCGCTGTTTGTGTTTCGTATCAGGTAACGACGGCGGCTGCGCTGAAAGTGTgatattaattattcaattaaaaattaatgtaaagTCAACTGCGTTTCTGAGAAAAATGGCCAGTCGCACATTTCTTCTTCGTCAACGAAAATAgttccatgaaaaaaaaactttttttaactaTCGCCAAGCAACGCACAAACTAAATAGCATATATGGGTGGAGCTGAGCGACATATCCCCCTTCCCCCACGCAACGCGAAATCAATGCTCCGGTTCCGCTCCGGATTTTACTCCCCACTCCGAAAAAACGCGCACCCGCTCCGCTTCTGCGGCGACATGTTTCTCCGTGAACACGAATAAGCGGAGTGATACGAACAGTGAAAAGTCCGCATAACAAAATCAAAAAGCGGCTCATCCAATCAAATTCGTGGACCGGAACTAACTGTTGTACGTAATAGCTAGATAACGGTGTCCAAAACGAACCCATTTAATCCCAAATTTTCCCTGCTAAATCAGACCAAAAATTTGAGACGTTGAAGCCAATTGGCTAAATTTAAGCAAAATTTGAAATTTGCTAATTCATCAATTGATATTTTTACTACTCTGCGATTGTGtggaaaatgcatttcaaagacAGGccacatgcatttctttatttcgttaaatgtaacaaaattccttaaaatgcattgaaatgtaTGCAAGTTTCAATCAAACAGTCATTCAAAATGGCTTTCTCATTAATCACAAATTTGTTCAAtgacatgaaattaaattaaacgtaGTCTATATTGCAATGCGATTCATACAAAACAGTGttcttaaaattatattaatgatagacccattaaataaagcaaactaAAATGATCGCATTACATCAAGGCAGTCTGTGCCTTCATATATTGCTGATAATAAAcgcatgtaaaataaatacagaaataaaactttttctaGATCCCTCAAAGCCtaaagcaaataataattagttactttttgtgCTTTTCCGAGTATGCAAAGAGGAAATGCGGTCACAAATGTTAATGTGGGATTAAATGGGTTCAAACATTGTGCAAGGGATGAACTGTAAAAACTGAAAGCTTTTTAAATACGAACCATTCAGTATTTAGCGGCAATTAATGGCAGTTTGGCCTGACTGAAGCAGTGTTCTTCATTCTTCACAGCAATGCTTTCAGGCTTTGAGCCTTTGCATTGCTCATTGGAATGTTTAATTCTCGAATGTGTGATATTAAATCTTGTTTTACCTCATACCTGTATAATGTGCAAATTGTACAAGGAGGACgttgtttatattaaacaaatgttaaaatgtacagtatttatttgatgcaTTGTACagcatatacaaaaaaaaatagcgtggcaatgttataatgttaaatattacttGTGATTTGCACCTTATTTGTGTCAAATGTGAGCTGCCCGCGGGGCAAAGAGCTTCTTgcattttccattcattttgaATTTCTACCAGTTATAAATGTTAGATTGATTTATCTGTAAATGAGACGCACAGACATATTTTTGGGCAGGAATATATCGTCTAAACTTCACATTTCTACAGAAATAATTTATGTACCAGTGCCTCATGTGAAGTATTGTGCAAGATTCATCATGTTGACGTCAAGTTGGATAGCGTGCAATAAAATGTGATATCGTGAAAAGGCA

Function

GO:

id name namespace
GO:0007189 adenylate cyclase-activating G protein-coupled receptor signaling pathway biological_process
GO:0002027 regulation of heart rate biological_process
GO:0045823 positive regulation of heart contraction biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004940 beta1-adrenergic receptor activity molecular_function

KEGG:

id description
K04141 ADRB1; adrenergic receptor beta-1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU130240 lncRNA downstream 4169 13365953 ~ 13368320 (-) True G88003
TU130017 lncRNA downstream 564843 12804696 ~ 12807646 (-) True G87860
XR_006252231.1 lncRNA downstream 733753 12613150 ~ 12638736 (-) True LOC122355629
TU129849 lncRNA downstream 885094 12438750 ~ 12487395 (-) True G87746
TU129766 lncRNA downstream 1025423 12344898 ~ 12347066 (-) True G87695
TU130253 lncRNA upstream 53918 13429406 ~ 13432195 (-) False LOC122355808
TU130263 lncRNA upstream 58406 13433894 ~ 13434125 (-) True G88019
TU130280 lncRNA upstream 82968 13458456 ~ 13459865 (-) True G88034
TU130281 lncRNA upstream 84657 13460145 ~ 13461245 (-) True G88035
TU130329 lncRNA upstream 163203 13538691 ~ 13539383 (-) False entpd1
XM_043253061.1 mRNA downstream 37697 13325153 ~ 13334792 (-) True tdrd1
XM_043253062.1 mRNA downstream 38169 13325153 ~ 13334320 (-) False tdrd1
XM_043253064.1 mRNA downstream 38369 13325153 ~ 13334120 (-) False tdrd1
XM_043253063.1 mRNA downstream 38369 13325153 ~ 13334120 (-) False tdrd1
XM_043253066.1 mRNA downstream 38369 13325153 ~ 13334120 (-) False tdrd1
XM_043254151.1 mRNA upstream 6156 13381644 ~ 13398387 (-) True nhlrc2
XM_043254222.1 mRNA upstream 30305 13405793 ~ 13410281 (-) True plekhs1.1
XM_043254219.1 mRNA upstream 38693 13414181 ~ 13418256 (-) False LOC122355682
XM_043254220.1 mRNA upstream 38693 13414181 ~ 13418215 (-) True LOC122355682
XM_043254221.1 mRNA upstream 38693 13414181 ~ 13418193 (-) False LOC122355682
TU130001 other downstream 619811 12751904 ~ 12752678 (-) True G87845
TU129915 other downstream 697017 12649383 ~ 12675472 (-) False prr15lb
TU129914 other downstream 697017 12670625 ~ 12675472 (-) False prr15lb
TU129639 other downstream 1421334 11949271 ~ 11951155 (-) False G87608
TU129586 other downstream 1536877 11832879 ~ 11835612 (-) True G87569
XR_006252221.1 other upstream 236246 13611734 ~ 13691339 (-) False tcf7l2
XR_006252219.1 other upstream 236246 13611734 ~ 13691338 (-) False tcf7l2
XR_006252218.1 other upstream 236248 13611736 ~ 13691338 (-) False tcf7l2
XR_006252220.1 other upstream 238659 13614147 ~ 13691338 (-) False tcf7l2
XR_006252179.1 other upstream 597394 13972882 ~ 13976511 (-) False srsf2a

Expression Profile