RNA id: XM_043253097.1


Basic Information

Item Value
RNA id XM_043253097.1
length 1484
RNA type mRNA
GC content 0.40
exon number 6
gene id emc9
representative True

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 5415899 ~ 5419866 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCATGAGCGCTGGGCGTCACGAAGAAAAGGACGCTGCCGTTATCCTCATGTCCATTTCCTTCGAGTTCTTTTCAAGTAAACAGTCATATGTTCtcgttttaatgtgtttgagtTAATTATTTGGATTTCATATTTGattactgaaaaagaaaacacaacgATGGGTGAGGTGGAGTTGTCCTGTCTGGCTTATGCCAAAATGTACCTGCATGCAAGTCAGTTTCCTCGTTGCAGTGTGAACGGCCTGCTGTTGTCCTCCAGTCCAGCCGGGGCAGCGGTCTGTATCACAGACTGTGTGCCGCTGCTTCACTCGCACTTGTCTCTGGCTCCAATCACGCAGCTCGCTCTTACACAGGTCGACGTTTGGtgttcacaaacacagcagaggattgtgggatattATCAAGCCAATGCTTGTGTCTCAGACAGCAGCCCTACACCATGTGCATTGAAGATTGCGGAGAAGATCTTCGAGCAGTGTAACAATGCTGTTTTGCTTATGATTGATGGAGAAAAGATGTTTCCAGGCTGCCGTGTTCCTCCGATCGTGATGTATGAGCGGAAAGACTCCCGCTGGGCTCTCAAAGACAAACACACAATAATGCTTCGACAGTGGGAAGAAACCTGCTCCATAGTTAATCAGCTGTTCAGCTCTGGTGATCAGGCGCTACTGGTGGACTTTGACAGCCATTTGGATGACATCACAAAAGATTGGACCAATCAGAAACTGAATGCCAAGATCATGGAGCTGATCTCCCCAGCCAATGGGAATGTTTAACTGTATAGACTAATCTGCTAATGTAATAGTTTTCCTCCCCTCAGATTGTGTTTTTAAGATTATTAGACTAATTATATTTTGACACATTTGTCATAAATTATGTCCTCAGATATGCaaaaagaaacgtttttttttttttttttttttggtacaatTTGGTTCTTTGACCTtataataaacttaaatttacacCGAGGTGGACTCGTAGTACAAGCAGCATATAACTTTGATCACTCTGATTGCCTgttatattttagtcatttaacaataggctattcattttttttttttttaaatctatttaaacattaaagtaaTCTTTAAGAAAACTATGTATGGTTCCTCAGGTGCTGTCGATACATggtgtttttcattttacagacTTAACATGAAAaacttttgattaaaaatagattttatgttGTAATGAAGTAGTCCTAATATTTAGCTTTAACTACAAAAAGGTTAGAAGTCTAATAATTTAGATGATTCCTTCCAGCAAACTGAGAGCAAGTCAGCGCTCAGAGTAGTGTGAGTGTATGATTCATGTGAGGTGTGTGCCACGATATGTGGATCTTCAGGTCTGTCTGGAGCTTATATTTGTTCTGATGCCTTTTTTTCCACTGCAGCACTGCTGATGTTTGCATTTCCTAACCTGTATGACTGACTTTCCTCtagaacataaaagaaaatatttaggaaacaa

Function

GO: NA

KEGG:

id description
K23569 EMC8_9; ER membrane protein complex subunit 8/9

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU126767 lncRNA downstream 962623 4452755 ~ 4453276 (-) True G85572
TU126762 lncRNA downstream 1002537 4412624 ~ 4413362 (-) False LOC122355055
TU126764 lncRNA downstream 1003699 4411340 ~ 4412200 (-) True G85569
TU126745 lncRNA downstream 1102851 4312579 ~ 4313048 (-) True G85553
TU126743 lncRNA downstream 1103995 4311453 ~ 4311904 (-) True G85551
TU127055 lncRNA upstream 3218 5423084 ~ 5426127 (-) False lsm5
TU127056 lncRNA upstream 3218 5423084 ~ 5426511 (-) False lsm5
TU127129 lncRNA upstream 307438 5727304 ~ 5731090 (-) True G85868
TU127155 lncRNA upstream 390791 5810657 ~ 5814446 (-) True G85889
TU127161 lncRNA upstream 400483 5820349 ~ 5821178 (-) True G85891
XM_043253686.1 mRNA downstream 48756 5360364 ~ 5367143 (-) True pelo
XM_043253843.1 mRNA downstream 85666 5280381 ~ 5330233 (-) False ccser2b
XM_043254308.1 mRNA upstream 3637 5423503 ~ 5425993 (-) False lsm5
XM_043254413.1 mRNA upstream 57656 5477522 ~ 5486280 (-) True ghdc
XM_043253798.1 mRNA upstream 67934 5487800 ~ 5504829 (-) False stat5b
XM_043253797.1 mRNA upstream 67934 5487800 ~ 5504829 (-) True stat5b
XM_043253256.1 mRNA upstream 115307 5535173 ~ 5540436 (-) True foxh1
TU127021 other downstream 18987 5322478 ~ 5396912 (-) False G85779
TU127027 other downstream 18987 5322478 ~ 5396912 (-) True G85779
TU127020 other downstream 18987 5390608 ~ 5396912 (-) False G85779
unassigned_transcript_1919 other downstream 1019406 4396412 ~ 4396493 (-) True trnal-uag_71
unassigned_transcript_1918 other downstream 1022744 4393074 ~ 4393155 (-) True trnal-aag_72
TU127052 other upstream 3218 5423084 ~ 5426511 (-) False lsm5
TU127053 other upstream 3218 5423084 ~ 5426127 (-) True lsm5
TU127203 other upstream 565123 5984989 ~ 5987780 (-) True G85925
TU127212 other upstream 571047 5990913 ~ 6007107 (-) True G85930
XR_006252216.1 other upstream 631857 6051723 ~ 6054353 (-) False LOC122355418

Expression Profile