RNA id: XM_043253136.1


Basic Information

Item Value
RNA id XM_043253136.1
length 1894
RNA type mRNA
GC content 0.40
exon number 3
gene id chac2
representative True

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 10610648 ~ 10613502 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTCCTAGTAACAAAGACTAGCACTCTGTTCATAGATTCGACTAAATTAACGCAGCACGGTTTTTAACatagatatgtatataattttttagcGAAATCATATATAAACAGTACTGCGCTGTGTGTACGGCGGCTTGTAAATTAAAAGGCCACGGATGTGAGACATATTTTCGGCCAGATCTGTGTCTGACCTCGGCAAGTAACGTCCTGACTTTCTTTTGTACTCTTTAGCATATTAATTACCGCATTGTCCACACTTATGCCAACGGTGTCGACATACCTAACCACACTCGTGAGCGCCGCACGAGCCCTAAAAAATCCCGTCCATCGACATACGTGTGGAGTATGTGTTCAGACACACCGTGAGCTGTCAGCAGGAAGCATGTGGGTTTTTGGTTACGGCTCTTTGATTTGGAAAGTTGACTTTCCGTACGAGGAGAAACGAGTGGGTTTCGTCAAAGGTTTCAGTCGCAGGTTCTGGCAGGGAAGCACGGATCATCGCGGGGTGCCCGGGAAGCCTGGGCGAGTGGTGACATTAATAGAGGACCCCGAGGGCTGCGTATGGGGCGTTGCTTATAAATTGCCGTCAGGCCGAGAAAATGAAGTGAAAGAGTATCTGGACTACAGAGAGAAAGGCGGCTATGGGGTGATCACCGTTACCTTTTATCCCAAAGATGAAGAACATCAACCAATGCGGGACACATTGCTCTACATTGGCTCCTGTGACAACCCGAATTACCTTGGCCCGGCACCTTTGGAGACAATTGCTCAGCAGATTGTGAAGTCCGTCGGCCCCAGTGGCAAGAATACAGATTACCTGTTTGAGCTGGCCGAGGCCCTCAGGCAGCTAATACCTGAAGACTTAGACGATCACCTGTTCTCTTTAGAGCGCCTTGTGAAGGAGCTGCAGAAGCAGGAGGAGATGGAGTGATCTGCTACAGTCCGCTTTGTCCTTAATCTTCTGAAAAACTCAGGAATTTAGTCCATTTTTTTGGTCCTCATATACAGATTATGATATCCGATGCATGCTAAAAGGGATTACCTGATAAAGCGTGAGATAAGCAGTACTTAAACcactgttatgtttttaaataggaTTATTTAATATGTGGTAGTCTCTACTGAATCTGCACTTGATTTACGATGTGACGTTTCACATCATTTGTCTCGCTTTAAAACTTCAGATACGAACCAAGAACTTAAAAGGATTTCGGTATATTGCACATAACGTTGTTACGTCCATGAAAATGTAAACGAAAGGACAGTTTATTTTTCAGAGGCTGGTTCATTTAACTCAGGATACTTGAATATGTTACAAAGCcatttcctatttatttttgaagttcCATGCCATCCTGATCTTCAATTAAGCCATAAGGTGAATCTCATTAACAAACATGCTTAAGTCACCGTATTACCcccaaatgtacaaaataattagaataaacCAAATTAAACGTTATTGAACCCTAGTTATCTTTCGTTGTGTGACGTTTTAATTACATGAAACCGTTTCATTTCCAACCAAATTCAAACTAACACTAACGGTGTACTTAAAATATTAgattgttttactttaatgtgtttttttattataattctaGTTATAaattatctatccatccatccatcatttgtGAAATTCACCCAAGCAAAGCTTTAATTTATCTctttttatgcataatttatcagttattgtttaaaaaaaaaagtcagaatcaTTGCACCTCCACTGTAGCACAAGTCTATTGTATTAACGATGTTCTGCGGACAGGATCTTCGACTTCACCACTGTAACTAGCTCATAATGATGACTTAATGACGGTTGCATATTTCTTGTGAGACCCAGAtaagaataattttaaaataaagcattgtgggagcataaaaaaaaa

Function

GO: NA

KEGG:

id description
K07232 CHAC, chaC; glutathione-specific gamma-glutamylcyclotransferase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU128985 lncRNA downstream 4629 10605232 ~ 10606019 (-) True G87164
TU128933 lncRNA downstream 28112 10579205 ~ 10582536 (-) True G87125
TU128925 lncRNA downstream 30878 10578754 ~ 10579770 (-) False G87125
TU128879 lncRNA downstream 165870 10409339 ~ 10444778 (-) False LOC122355705
XR_006252238.1 lncRNA downstream 165873 10412331 ~ 10444775 (-) True LOC122355705
TU129332 lncRNA upstream 179561 10793063 ~ 10804738 (-) True G87388
TU129314 lncRNA upstream 203059 10816561 ~ 10864596 (-) False G87376
TU129316 lncRNA upstream 204456 10817958 ~ 10864596 (-) True G87376
XR_006252171.1 lncRNA upstream 255346 10868848 ~ 10894717 (-) True LOC122355137
TU129351 lncRNA upstream 282339 10895841 ~ 10896147 (-) True G87406
XM_043254356.1 mRNA downstream 465919 10138438 ~ 10144729 (-) True LOC122355804
XM_043253352.1 mRNA downstream 670799 9311653 ~ 9939849 (-) False thrab
XM_043253390.1 mRNA downstream 805138 9788025 ~ 9805510 (-) True LOC122355287
XM_043253367.1 mRNA downstream 854601 9743392 ~ 9756047 (-) False LOC122355272
XM_043253366.1 mRNA downstream 854601 9743392 ~ 9756047 (-) True LOC122355272
XM_043253419.1 mRNA upstream 286751 10900253 ~ 10915884 (-) False foxn2b
XM_043253418.1 mRNA upstream 286751 10900253 ~ 10915883 (-) True foxn2b
XM_043253414.1 mRNA upstream 305277 10918779 ~ 10931157 (-) False fbxo11b
XM_043253416.1 mRNA upstream 305277 10918779 ~ 10931157 (-) False fbxo11b
XM_043253417.1 mRNA upstream 305277 10918779 ~ 10931157 (-) True fbxo11b
XR_006252200.1 other downstream 1121336 9484946 ~ 9489312 (-) False ormdl3
XR_006252199.1 other downstream 1121336 9484946 ~ 9489312 (-) False ormdl3
TU128628 other downstream 1121358 9481559 ~ 9489290 (-) False ormdl3
TU128627 other downstream 1121358 9481630 ~ 9489290 (-) False ormdl3
TU128530 other downstream 1732536 8875617 ~ 8878112 (-) True LOC122355288
TU129388 other upstream 429386 11042888 ~ 11045882 (-) True LOC122355648
TU129464 other upstream 707921 11321423 ~ 11322603 (-) True G87489
TU129586 other upstream 1219377 11832879 ~ 11835612 (-) True G87569
TU129639 other upstream 1335769 11949271 ~ 11951155 (-) False G87608
TU129915 other upstream 2035881 12649383 ~ 12675472 (-) False prr15lb

Expression Profile