RNA id: XM_043253168.1


Basic Information

Item Value
RNA id XM_043253168.1
length 1199
RNA type mRNA
GC content 0.43
exon number 6
gene id mylpfb
representative True

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 5875085 ~ 5878221 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGTTCAGGCTAAAGTTAGTACACCCAGACTGGTATATAAGAACCCAGAGGGGAACTGAGAAGATGTCAGTCACATCAGCGTGCTGTATACTTCCCCTCTTTTGACCAACTGCAAAAACTTTGAGATgGCACCCAAGAAGGCCAAGAGGAGGCAGCAGGCAGAGGGCGGCAGCTCTAATGTCTTCTCCATGTTTGAGCAGAGCCAGATTCAGGAGTACAAGGAGGCTTTCACAATCATTGACCAGAACAGGGATGGTATTATCAGCAAGGACGATCTGAGAGATGTGCTGGCCTCCATGGGTcagttaaatgtgaaaaatgaggAGCTGGAAGCTATGGTCAAAGAGGCCAGTGGCCCCATCAACTTCACTGTGTTCCTCACCATGTTTGGTGAGAAGCTGAAGGGCGCTGATCCTGAGGATGTTATCGTAAGTGCTTTCAAAGTTCTGGACCCTGAAGCTACAGGCACCATCAAGAAAGAATTcattgagGAACTCCTGACCACCCAGTGCGACAGGTTTACCGCTGAGGAGATGAAAAATCTTTGGGCTGCCTTCCCTCCAGATGTGGCTGGCAACGTAGACTACAAGAACATCTGCTACGTCATTACACACggagaagagaaagaggaagaataAGTCCATCAACCATCTCTCTACCTCCTATCATTACCACAACATCCTGTTACATGTTCAGTCTTCCCATGGTCTATCTGTCCTTTCAAAGAAAGATGTTTCTAAATTGGAGGTCTGTTAGAATTTGGGCTGTCTGAATGTGAGTCACATGGAGCTAATgtgattattttcaataaaataatccaaaatCACAATCTCTCCATTCTCTCTGCTATTGTTTCCCTTCATAATTGTATAAGCAGAGGAGATATTTAAAGAGATGGCGCATCTCTGTAACAGAGTGCCACCTTCTCTATCAATGTCTCCCATTTGTTTTCTTGGAGAgacagaaatattaagaaagaaagacatttagCAGTAAAAGAAGACACAGAGGATAACAAGGTGAGGATgaggaaaagaaacaaaagaaaacatctttGTTTTTACTTCCCCTCCCCTGTTTACTCCTCCATTCCAAAGTCctattttcttgcatttttctttcctttctcttaATTCATCTCTTTGTCATCAAAATCACCTGTAACTCAAAgataacacaaataaaagcatctAAATCTTT

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K12758 MYLPF; fast skeletal myosin light chain 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU127163 lncRNA downstream 36128 5838559 ~ 5838957 (-) True G85893
TU127162 lncRNA downstream 37411 5837372 ~ 5837674 (-) True G85892
TU127161 lncRNA downstream 53907 5820349 ~ 5821178 (-) True G85891
TU127155 lncRNA downstream 60639 5810657 ~ 5814446 (-) True G85889
TU127129 lncRNA downstream 143995 5727304 ~ 5731090 (-) True G85868
TU127200 lncRNA upstream 79357 5957578 ~ 5957779 (-) True G85922
TU127201 lncRNA upstream 80074 5958295 ~ 5958527 (-) True G85923
XR_006252182.1 lncRNA upstream 94252 5972473 ~ 5981072 (-) True LOC122355182
XR_006252183.1 lncRNA upstream 94252 5972473 ~ 5977519 (-) False LOC122355182
XR_006252181.1 lncRNA upstream 94252 5972473 ~ 5977519 (-) False LOC122355182
XM_043254385.1 mRNA downstream 112474 5748277 ~ 5762611 (-) True pkmyt1
XM_043254386.1 mRNA downstream 112482 5748277 ~ 5762603 (-) False pkmyt1
XM_043253671.1 mRNA downstream 128555 5736592 ~ 5746530 (-) True sult1st6
XM_043254045.1 mRNA downstream 141797 5703313 ~ 5733288 (-) True avl9
XM_043254041.1 mRNA downstream 184696 5685526 ~ 5690389 (-) True buc2l
XM_043253059.1 mRNA upstream 139770 6017991 ~ 6022156 (-) True neurod2
XM_043253681.1 mRNA upstream 172947 6051168 ~ 6078068 (-) True LOC122355418
XM_043253679.1 mRNA upstream 319261 6197482 ~ 6280348 (-) False LOC122355417
XM_043253675.1 mRNA upstream 319261 6197482 ~ 6280348 (-) False LOC122355417
XM_043253676.1 mRNA upstream 319261 6197482 ~ 6272677 (-) False LOC122355417
TU127052 other downstream 448574 5423084 ~ 5426511 (-) False lsm5
TU127053 other downstream 448958 5423084 ~ 5426127 (-) True lsm5
TU127021 other downstream 478173 5322478 ~ 5396912 (-) False G85779
TU127027 other downstream 478173 5322478 ~ 5396912 (-) True G85779
TU127020 other downstream 478173 5390608 ~ 5396912 (-) False G85779
TU127203 other upstream 106768 5984989 ~ 5987780 (-) True G85925
TU127212 other upstream 112692 5990913 ~ 6007107 (-) True G85930
XR_006252216.1 other upstream 173502 6051723 ~ 6054353 (-) False LOC122355418
XR_006252215.1 other upstream 186077 6064298 ~ 6073432 (-) False LOC122355418
TU127372 other upstream 792098 6670319 ~ 6671247 (-) True G86049

Expression Profile