RNA id: XM_043253175.1


Basic Information

Item Value
RNA id XM_043253175.1
length 1665
RNA type mRNA
GC content 0.45
exon number 7
gene id noxo1b
representative False

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 8082634 ~ 8085604 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTCGCTCATCAGAAACCGCTTCAGCTATGAGTGATCCGCGCTTTCCGGTCGACGTCCGACTCATCGGAGTAATGAAGAAAGACAAGGACAAAGTATGAATATGTTGTATGTGCGCAGGATAACTTGATAACGTACCGAGGCAACTGAAAAAGAAGTTTCCTGTGGAGAATCACTTTCGTAAAGAAGATAGAGTGCTTCCCAGATTTGGAGCCCAGTTCATGGTGACTTCATTTCAGATGAAAGGTTTGGATAAGTCAGTGTCTCGTCTAAGGTATCTGGAGAAGTACTGTTCCAACCTGTTGCAGTGCGACACAACTGTGTCACATTCCACAGACGTTATTCAGTTCTTCTTGCCAACCGAACAGGAGCTCCGACCGGAATATACCCAGAACAGTGTGATGATTCTGCAATCAGACAACATAAACAATGTCAGCGGAGGACCTGAATTGGtgaataaaaatctaaacaatgGCAATGTGTCCCAGCCATTTGTATCCAAGACGTATCGGTGTGTGGCTCCATATGAGACAAAAGATACAAAGAACAGGCCATTTAAAGTAGCTGTGAATGAAAGACTGGATGTGCTGATTAAAGACAAAGCAGGTTGGTGGCTTGTTGAGAATGAAGATAAACGTCTAGCTTGGTTTCCTGCTCCCTACTTGGAGTTATGTGATGAGGAAGGGGAAGAGGAGGATGTTGAAGATGACTTTTATTCCCCAACCTATCAAAGTTCTCTGTACTGCGCTACAAGAAGCTACACCTCAAAAAAAGAGGACGAGATCTCTCTGAGCATCGGTGCTGTTGTGGAGGTGTTACAGAGGTCTGATAATGGCTGGTGGCTTGTTAGATATAACAGAAAGGCCGGGTATGTGCCCTCCATGTACCTGAAGCTCTACAGCAGCCCCAGCTTTGGCCTTCAGACACTCCAGAGGAAACTTCACAGCTCCACTATCAACCTGTCTGCCAGCAACTCTTTCAAACTGGAGCCTCAGGTCCGTTCACGAAACAGAAGGAATAGTTTTCTTAAATCAAACTCTGTGGAAATGCTGTCTGAGCCGGGACAGCATGAGGAAGCTGGCAGCTTCAGCGATGACGGAAACGATTTCAGCTTCAGTTCCTCTGACACCACCTCCATGAGCCCAAGCATGTCCAGCTCAGAGGGGGAAGAGGGCCTGAGACAGCAGGATAAAGAGCCAGAAAGCAACGATAGTGGTATGTCCAGCGGTCAGTCCAGCCCCTCCAGCTCAGACACTGATCACCCAATGAAAGGAGTCGGAGCTCCCAGGGTGCCACCAAGACCTCAGACTCAGGAGATCCTACGTCGCTGCACGACCTACACCCGAAATGTTGCTCTGGCGACCTCTGCACGCCTGGCCCCTGAAAGAGAAATCATGGTACATGGAGGGAGAGCATGAAAGAAGTGCATATGACAATAAGAGACTCTTTCCTTTTCTGCCTTCTTTTTGATCATCTTTGAGCATGATACTACAATATTAATCTTTGTAATCTCTTTGTAATGGGgaaatattaatagtataaatattcaattaatcaaatatattatacataaccTGTTAAGGGTAGTTACAGTGTACATATTTAAAGGgttgtttttcattaatgttGTATTCAGAACTGTTATCTGTAGTCCTGAGCTtccattca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU127924 lncRNA upstream 22524 8056931 ~ 8060176 (+) True G86460
TU127808 lncRNA upstream 235838 7846558 ~ 7846862 (+) True G86374
TU127671 lncRNA upstream 238617 7825272 ~ 7844083 (+) True LOC122355675
XR_006252237.1 lncRNA upstream 238917 7833102 ~ 7843783 (+) False LOC122355675
TU127670 lncRNA upstream 248555 7825272 ~ 7834145 (+) False LOC122355675
TU127947 lncRNA downstream 19544 8105148 ~ 8106773 (+) True msrb1b
TU128039 lncRNA downstream 110381 8195985 ~ 8196196 (+) False hbbe2
TU128041 lncRNA downstream 112490 8198094 ~ 8198410 (+) True G86540
TU128037 lncRNA downstream 117979 8203583 ~ 8204143 (+) True G86536
XR_006252254.1 lncRNA downstream 118541 8204145 ~ 8206748 (+) False LOC122355856
XM_043254182.1 mRNA upstream 30314 8049576 ~ 8052386 (+) True foxl3
XM_043254223.1 mRNA upstream 36661 8009380 ~ 8046039 (+) True fam20cb
XM_043253562.1 mRNA upstream 111146 7902114 ~ 7971554 (+) False LOC122355373
XM_043254352.1 mRNA downstream 487 8086091 ~ 8089327 (+) True rnf151
XM_043254416.1 mRNA downstream 17095 8102699 ~ 8105036 (+) True neurl2
XM_043254418.1 mRNA downstream 17095 8102699 ~ 8105036 (+) False neurl2
XM_043254417.1 mRNA downstream 17095 8102699 ~ 8105036 (+) False neurl2
XM_043254415.1 mRNA downstream 17097 8102701 ~ 8105036 (+) False neurl2
TU127672 other upstream 238617 7815823 ~ 7844083 (+) False LOC122355675
TU127500 other upstream 774471 7307924 ~ 7308229 (+) True G86143
TU127497 other upstream 777852 7303138 ~ 7304848 (+) False G86142
TU127344 other upstream 1560129 6521829 ~ 6522571 (+) True G86029
TU127334 other upstream 1641174 6440821 ~ 6441526 (+) True G86019
unassigned_transcript_1921 other downstream 619656 8705260 ~ 8705331 (+) True trnaq-cug_20
XR_006252198.1 other downstream 750844 8836448 ~ 8852449 (+) False arsg
TU128728 other downstream 1671669 9757273 ~ 9759461 (+) False LOC122355274
TU128819 other downstream 1786060 9871664 ~ 9873895 (+) False LOC122355252
TU128881 other downstream 2396011 10481615 ~ 10487341 (+) False LOC122355192

Expression Profile