Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043253226.1 |
| length | 2360 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 3 |
| gene id | foxj1b |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056710.1 |
| NCBI id | CM032079.1 |
| chromosome length | 20499150 |
| location | 8263110 ~ 8266628 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0050869 | negative regulation of B cell activation | biological_process |
| GO:0060088 | auditory receptor cell stereocilium organization | biological_process |
| GO:0050900 | leukocyte migration | biological_process |
| GO:0042130 | negative regulation of T cell proliferation | biological_process |
| GO:0032088 | negative regulation of NF-kappaB transcription factor activity | biological_process |
| GO:0003146 | heart jogging | biological_process |
| GO:0000122 | negative regulation of transcription by RNA polymerase II | biological_process |
| GO:0060972 | left/right pattern formation | biological_process |
| GO:0002897 | positive regulation of central B cell tolerance induction | biological_process |
| GO:0035089 | establishment of apical/basal cell polarity | biological_process |
| GO:0002635 | negative regulation of germinal center formation | biological_process |
| GO:0002924 | negative regulation of humoral immune response mediated by circulating immunoglobulin | biological_process |
| GO:0030036 | actin cytoskeleton organization | biological_process |
| GO:0030324 | lung development | biological_process |
| GO:0001947 | heart looping | biological_process |
| GO:0033085 | negative regulation of T cell differentiation in thymus | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005667 | transcription regulator complex | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0008134 | transcription factor binding | molecular_function |
| GO:0003690 | double-stranded DNA binding | molecular_function |
| GO:0008301 | DNA binding, bending | molecular_function |
| id | description |
|---|---|
| K24664 | FKH; forkhead protein FKH |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU128056 | lncRNA | downstream | 63986 | 8198918 ~ 8199124 (-) | True | G86553 |
| TU127998 | lncRNA | downstream | 72825 | 8187641 ~ 8190285 (-) | True | G86505 |
| TU127996 | lncRNA | downstream | 74193 | 8187641 ~ 8188917 (-) | False | G86505 |
| TU128010 | lncRNA | downstream | 108937 | 8148747 ~ 8154173 (-) | True | G86513 |
| TU128016 | lncRNA | downstream | 150397 | 8111193 ~ 8112713 (-) | True | G86516 |
| TU128087 | lncRNA | upstream | 23452 | 8290080 ~ 8290410 (-) | True | G86576 |
| TU128132 | lncRNA | upstream | 67779 | 8334407 ~ 8338700 (-) | False | cpped1 |
| TU128137 | lncRNA | upstream | 72828 | 8339456 ~ 8339815 (-) | True | G86606 |
| TU128139 | lncRNA | upstream | 77708 | 8344336 ~ 8344609 (-) | True | G86608 |
| TU128374 | lncRNA | upstream | 245007 | 8511635 ~ 8513245 (-) | True | LOC122355061 |
| XM_043254435.1 | mRNA | downstream | 57390 | 8203574 ~ 8205720 (-) | True | zgc:163057 |
| XM_043253164.1 | mRNA | downstream | 67894 | 8194223 ~ 8195216 (-) | True | hbae5 |
| XM_043253703.1 | mRNA | downstream | 84003 | 8155233 ~ 8179107 (-) | False | arhgap17a |
| XM_043253702.1 | mRNA | downstream | 84003 | 8155233 ~ 8179107 (-) | True | arhgap17a |
| XM_043253112.1 | mRNA | downstream | 134091 | 8126083 ~ 8129019 (-) | True | zdhhc4 |
| XM_043253549.1 | mRNA | upstream | 1146 | 8267774 ~ 8278165 (-) | True | mgrn1a |
| XM_043253548.1 | mRNA | upstream | 1146 | 8267774 ~ 8278164 (-) | False | mgrn1a |
| XM_043253545.1 | mRNA | upstream | 37139 | 8303767 ~ 8325041 (-) | True | mrtfba |
| XM_043253546.1 | mRNA | upstream | 37139 | 8303767 ~ 8319095 (-) | False | mrtfba |
| XM_043253547.1 | mRNA | upstream | 58615 | 8325243 ~ 8331539 (-) | True | ercc4 |
| TU127575 | other | downstream | 874200 | 7388236 ~ 7388910 (-) | True | G86203 |
| TU127438 | other | downstream | 1158892 | 7103880 ~ 7104218 (-) | True | G86108 |
| TU127372 | other | downstream | 1591863 | 6670319 ~ 6671247 (-) | True | G86049 |
| XR_006252215.1 | other | downstream | 2189678 | 6064298 ~ 6073432 (-) | False | LOC122355418 |
| XR_006252216.1 | other | downstream | 2208757 | 6051723 ~ 6054353 (-) | False | LOC122355418 |
| TU128131 | other | upstream | 81534 | 8348162 ~ 8359980 (-) | False | cpped1 |
| XR_006252260.1 | other | upstream | 251607 | 8518235 ~ 8518365 (-) | True | LOC122355888 |
| XR_006252259.1 | other | upstream | 252352 | 8518980 ~ 8519109 (-) | True | LOC122355887 |
| TU128398 | other | upstream | 343924 | 8610552 ~ 8612445 (-) | True | G86783 |
| XR_006252240.1 | other | upstream | 416424 | 8683052 ~ 8687548 (-) | False | plbd1b |
