RNA id: XM_043253255.1



Basic Information


Item Value
RNA id XM_043253255.1
length 1079
RNA type mRNA
GC content 0.44
exon number 11
gene id dbf4b
representative False

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 5602681 ~ 5613207 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTCAGGAGGGCCATTTGAAAAGGTTCGCAGAGCGAGGCGGCacgttatatttatattgcctGTATTAACTATAAGATTGAGGATGTTTTAATACAACCGTTAGCGCGATATTTTTATTGACAGCGTATGCGCCAAGGACCTCAagTTTCAGTTCAAATAATGGCTGGAGAACATTCAGGTGTTTTGAGGGGCAAATCCTTCTACCTCCATGACTTGAAGAGACATCAGTCCGTCACACTCACTGACATCATCAGCCGACTGGGAGGGAAAGTAGACAGTTTTCTCACCAAGGATGTGAATGTGGTTGTGACGGGCATTAAAGCACCTCATCTGCAGATGGATGGTTCATGTACTGCAGAGGGAAACCAAACTGGAACTCCCAAACCTCTGGTTTGTGGCAGTCGTGGAAAAGCATTACTGGAAAAAGCAATCCACAGCAATaagTATCAGAGCAGTGTGTTGGCTAATGCTCGTTCCTGGGGAGTCAAAGTCTACAATGTTGACGaatttcTAAAGTTCATCAATCATCTAAATCAGAAAATGAAGACAGCTAAGaaaaaaagaagcaaactaACAACTCCTCATGTTAAAGCTGGAGTCTTGAGAGGTCCTTACCTGAAAGTGGAGGACTCAAGTCGGAAATTCAGACCATACTATGCACAGACTCTGAGTTTCCCAGTGGTGAGTTTCTCAGGAAAATTTAGCCCTTTTGAGCCCCTTATTCCTCGGCAGTCTAGTAGAAGTAAAGAAGTAGATTCCAGCAAGGATAATCTCAGgAAGAAGGAAGACACTACTAGCAGCTGCAATAAGTTGCAAGCACCACATAATGCAAGTGCCACACACAGAGGCCCAACTAAAAAAAGTTCAGGCTATTGCGAGTGCTGCCACATCGTCTACAAAGACCAGTATGAGGTCATCAACAGGCTTCTCTCACTTCCAACTGAGTAATTCAACTGCAATGGTGCCGAATTCTGTCAGCGAAAATGAAAAATCTCTCCAGAATTCCCTTGTTCAAGAATGTGATTGTCTACCGGCAAATACTGACAACAAGGCACACCCCATTCCTAAACCTATCCAGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU127056 lncRNA downstream 177759 5423084 ~ 5426511 (-) False lsm5
TU127055 lncRNA downstream 178143 5423084 ~ 5426127 (-) False lsm5
TU126767 lncRNA downstream 1150994 4452755 ~ 4453276 (-) True G85572
TU126762 lncRNA downstream 1190908 4412624 ~ 4413362 (-) False LOC122355055
TU126764 lncRNA downstream 1192070 4411340 ~ 4412200 (-) True G85569
TU127129 lncRNA upstream 114097 5727304 ~ 5731090 (-) True G85868
TU127155 lncRNA upstream 197450 5810657 ~ 5814446 (-) True G85889
TU127161 lncRNA upstream 207142 5820349 ~ 5821178 (-) True G85891
TU127162 lncRNA upstream 224165 5837372 ~ 5837674 (-) True G85892
TU127163 lncRNA upstream 225352 5838559 ~ 5838957 (-) True G85893
XM_043253870.1 mRNA downstream 3607 5564608 ~ 5600663 (-) True adam11
XM_043253872.1 mRNA downstream 3812 5569337 ~ 5600458 (-) False adam11
XM_043253871.1 mRNA downstream 8706 5569336 ~ 5595564 (-) False adam11
XM_043253256.1 mRNA downstream 63834 5535173 ~ 5540436 (-) True foxh1
XM_043253798.1 mRNA downstream 99441 5487800 ~ 5504829 (-) False stat5b
XM_043253920.1 mRNA upstream 7931 5621138 ~ 5626937 (-) True klhl11
XM_043254031.1 mRNA upstream 15539 5628746 ~ 5658945 (-) False aclyb
XM_043254030.1 mRNA upstream 15539 5628746 ~ 5658945 (-) True aclyb
XM_043254041.1 mRNA upstream 72319 5685526 ~ 5690389 (-) True buc2l
XM_043254040.1 mRNA upstream 72319 5685526 ~ 5690388 (-) False buc2l
TU127052 other downstream 177759 5423084 ~ 5426511 (-) False lsm5
TU127053 other downstream 178143 5423084 ~ 5426127 (-) True lsm5
TU127021 other downstream 207358 5322478 ~ 5396912 (-) False G85779
TU127027 other downstream 207358 5322478 ~ 5396912 (-) True G85779
TU127020 other downstream 207358 5390608 ~ 5396912 (-) False G85779
TU127203 other upstream 371782 5984989 ~ 5987780 (-) True G85925
TU127212 other upstream 377706 5990913 ~ 6007107 (-) True G85930
XR_006252216.1 other upstream 438516 6051723 ~ 6054353 (-) False LOC122355418
XR_006252215.1 other upstream 451091 6064298 ~ 6073432 (-) False LOC122355418
TU127372 other upstream 1057112 6670319 ~ 6671247 (-) True G86049

Expression Profile