RNA id: XM_043253288.1


Basic Information

Item Value
RNA id XM_043253288.1
length 9746
RNA type mRNA
GC content 0.50
exon number 31
gene id ep300a
representative True

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 8706745 ~ 8727704 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCTCAACGTGAACTTTTGATACTATTTTGATACTAACGTGACCGTACGACACGGTCTACAAAACACACCTATGCTCCGAGCAGATATGGCAGACAAGCAAAATGATTTCAAACATATCATCGTTCAATTCTCCAGCTCTTGACGGGACTGGATGAGTTGTAGAGCCGATGCGAGCgtcttttttctcctttcttgCCGAGCCGACTCCCCCTACCTCCTCCTCCGCTTGCAGAATTGtataaagaacaaaaatctgGCTGGGGAGGGGGGTTGATACGCCGAAGCTGAAATCGAGAGGCGAACCCAGGAAAGAGGAGTATTTTGTACACGGGACTTTCCCCCCCTTCGTCCCTAAAAAGGAGGgggaaatgtcatatttttaaaagcgatATTTTTAAAATCGAGGATTGCGAATAGGCTCAGGCGCCTATCTCTGaggatatatattttaattcgtTAAAAAATATGGCCGAGAACGTTCTGGAGTCTGGCCCGCCTTCAGCCAAGAGGCCTAAACTGTCCTCCCCGGCGCTATCTGCCTCAGCCAGCGATGGAAACGATTTTGGTTCGCTTTTTGACCTGGAGCATGACCTTCCGGATGAGCTGATCAGTTCCTCCGAGCTGAATCTAGCAAATGGAGGGGACCTCGGCCAGTTGCATGGCAATTTGGGTAGTGGGGGCCGGGCCATTGGAGGAGTTGTGTCTAGTGGCCAAGATGCAGCGGCCAAACACAAACAGCTCTCAGAACTCCTCCGGCATGGATCCGCATCTGCAGCACAGCAGCAGGGTGCAATGGGCAGTCCAGCAGGAGCCTCAATGGGGCTATTTGGGAATATGAAGGCTTCTCCGGGTACTCAGGGCATGGGCCCGCAAGGGCAGCAGCATCTTTCCCCGCAACAGGCCACGCTTATGCAACAGCAGATGCAGGGGATGGTGGGCAACATGAACAGGAATATGCTTGGACCTCAGAAAGGCAATGGACAGCAGCAGCCAGTAGGACCTGCGTCTCAGCAGCAAAACATGCTGGGAGCGCAGATGTTGAATGGATCTCCCCGAATAGGACATCATAACCCGGGCATGGGCAGCAGCAGTAACCTTTTAGCAGAGGCtcttcagcagcagcagacaGTAGGAGGTCAGGGTGGACTGAGGGCACAGCAGCCTGGAGCAATGAACAAGATGGGGATGAATGCAGGTTCAGGCCCCTATGGAGGCCCTTATGGTCAGCCTGCCAGTCAGGGTCTGGGTGTTGCGGGGCTGGCCCCTCAGCTCCAGAACAAACCAGGTCTCCCCAACAGTCCGGCTCAGTTTAACCTAGAAAAGAAGCCTGTGCAGGGCTTACCTGGCATGCAGGCTTCCCAGCCTTCCCCAGTTGGTGCTGCCGGAAGTGCAGGAGTTGGAGGTATGGTGCCTAACGCCCAAGGAACTCTAGGGCCAGGATCAGCTCCATCAGCCGTGTCCGCTACAGCGGTGGGAGGAGTTCCTCCAGCAGCCGACCCAGAAAAGCGCAAACTCATACAACAGCAGCTGGTGCTTTTGCTCCATGCCCACAAGTGCCAGCGGAGGGAGCAGGCCAATGGGGAAGTACGGCAGTGTAACCTGCCCCACTGTCGCACCATGAAGAACGTCCTTAACCACATGACGCACTGCCAGGCTGGCAAATCTTGCCAAGTGGCGCACTGTGCCTCATCCAGACAGATAATCTCTCACTGGAAGAACTGCACGCGGCATGACTGTCCTGTATGTCTGCCACTGAAAAACGCCGGGGACAAGAGGAATCaacagagtgagtCCCTCCTAGGCGCTGGGGGTGTGGGATTAGGTTCTTCTTTGGGTAATGTAACTGGTGGCCCACCCAGTACCCCCCATCTCAATACCCCAGGGCAGATAGACCCCAGCTCGATTGAGAGGGCTTACGCAGCATTGGGCCTTACATACCAGGGAAACCAGGCTTCCCCTCAGCCTGTCCAGCAAACACAACGGGCAATGAACACAATGGGAGCAAATCCCATGGGAGTAAACGGAGCAGTGGGTGCTCAGTCTCAGAATCAGCAAGCTAACCTTCTCCAGGATACAATGTTGCATCTGAACGTGAACTCGCAGAGTCTAATGAATGACAGTGGTGTGGGGTCAATGCCTGTGGCCAACCCAGCTGCTAGTGGTAGCATGAGGAAGAACTGGCACGAGGACATCACCCAGGATCTACGCAACCACCTTGTGCACAAACTagtCCAGGCCATTTTTCCCACTCCAGACCCAGCTGCACTGAAGGACCGGCGGATGGAGAATCTAGTGGCCTATGCGCGTAAAGTTGAGGGGGATATGTATGAGTCTGCTAACAGCAGGGCGGAGTATTATCACCTGCTGGCAGAGAAGATTTATAAGATCCAGAAGGAATTGGAAGAGAAGCGAAGGACGAGGTTACAGAAGCAGGGCATGATGCCTACTCAGCCTGGTATGCCCCCCACTGGCCTGCAGCAAGGCCCCACTGGGATTGGTCAGACAGGGCCACCCGCAGGACTGCCTTCTAATGGCCCTCTCTCTGATCCTTCAGCGGTGCGGCCTGCTGGTCCAAACCAGATGATAAACAGGATGCAGAATGCTGCCGGCATGAATCCCTTTGGGAACCATATGGGAATGCAGTCCATGGGCCAGAGATCTACACCACCTCTTCCACACAGCACACCTCTTAACCAGGGAAGCATGGGCAGTGTGAGGATGCCGCAGCCAAATGTTGCACAGATGCAAAATCAGTACATGCAAACTGGACCTTTTCAAGGTTCTAGTCCTGTTCTCGGTGCTGGATCTGTTGACATGGCACACCCTGGAAATGACAGCACTGTCGCTCAAcaggGACAAATGCCTACTTTATCATCTTTACCAATCGGCAGTCCTTTAGCACAGCCTGGGTCTGCTGGGGGGTCCAGCAGCGGGTCATCGGTGGGTTCTCTGGGTCCCAACAGTATGAGTGGAGTACCTCCATCGTCCACCCCAACACAGTCCATCAACCTCCCCCACTGCCCACCCGTCCACCAGAATTCTCCTTCCCCAGCTCACAGCCGAACGCCCACTCCCACGCCAGGCTCCCAGACACCCCAGCCTCACACACCCAGCCTTCCCCAGTTAGCAACGAGTGGCAGTCAGCAGCAGTTGCCTCCGTCCGCCAGTTCTGACAATGCCATGCAGCCTCAGCAGCAACCATTAGGAGGAACTCCTCCCGCTGTGTCTCATAGTGGCCTCTCTACGCCAAATGCCAGCCAGCATCCCCGCACTCCAttgtctcATAAGGGTTCTCTACCAGTGGATGGCCAGGCTGCTACTCCTGCCTCTGTCAGCAGTGCAGACACATCATTTCAGCAGGGTCCTTCAGACTCCACAACTACCCTTGAGCCTAAGGTGAAGGTCAAGCAGAAAGTagaagaggatgaggatgaggaagaagaaGGCATGTCAGGaggaaaaactggaaaaaaagaagacatcAAAGCTGAGGAAAAGCCTGAGATAAAAAAAGAGGAGCCGAGTGATGGTGTGCCAATGGAGACTTCTTCAGCTGCAGCTGGGGAGGACAAAAAGCCAGAGATAAAGACTGAGCCtaaggaagaggaggaaggtTCAGGGTCTGCAGCAACCCACAATTCACCCTCTGGAGTCcctaacaaaaagaaaaTTTTTAAACCAGAGGAGCTGAGGCAGGCCCTGATGCCCACACTGGAGTCTCTTTACCGTCAGGACCCTGAGTCGCTGCCCTTCCGCCAGCCTGTGGACCCTTCACTGCTGGGAATACCAGACTATTTTGACATTGTGAAGAATCCCATGGACTTGTCTACTATCAAACGGAAGCTCGACACGGGACAGTACCAAGAACCATGGCAATATGTGGATGACATCTGGCTCATGTTCAACAACGCCTGGCTGTACAATCGCAAGACGTCACGGGTCTACAAGTACTGCTCCAAGCTGGCGGAAGTGTTTGAGCAGGAGATCGACCCGGTCATGCAGAGTCTTGGCTACTGTTGTGGGAGAAAGTTTGAGTTTTCTCCCCAAACTCTGTGCTGCTATGGGAAGCAGCTATGCACTATACCGCGAGATGCTGCTTACTTTAGTTATCAGAACAGTTCACCAAAATATGGGCTTCTTGCTGACAGGTATCACTTCTGTGAGAAGTGTTTCAATGAGATCCAGGGTGAGAGTGTGTCCTTGGGAGATGACCCATCCCAACCTCAAACATCAATCAACAAGGATCAgtttgaaaagaagaaaaatgataCACTCGACCCTGAGCTATTTGTGGAATGTATGGATTGTGGTCGTAAGATGCATCAGATCTGCGTTTTGCACAATGACACTATATGGCCATCAGGCTTTGTGTGTGATGGCTGTTTGAAGAAGTCCAACAAGACCCGTAAAGAGAATAAATATGCTGCTAAAAGGCTTCCACAGACCAAACTAGGCAACTACTTGGAAACGAGGATTAATGACTTTGTGAAGCGACATAATCATCCAGAATCTGGTGAAGTCACTATTCGTGTTGTTCATGTCTCAGACAAAGTGGTGGAAGTCAAACCAGGCATGAAGTCTAGGTTTGTGGATAGTGGAGAGATGGCAGAGTCTTTCCCATATAGAACGAAAGCTTTATTTGCATTTGAGGATGTCGAGGGTgttgatgtgtgtttttttgggaTGCACGTGCAAGAGTATGGCTCAGATTGTCCACCGCCTAATCAAAGACGGGTTTACATATCCTACCTGGATAGTGTCCACTTCTTTCAGCCACGTTGTTTGAGAACAAGCGTGTACCATGAGATTCTTTTAGGATATCTGGACTATGCCAAAAAACAAGGgTTTACCACAGGACACATCTGGGCCTGCCCTCCTAGTGAAGGAGATGATTACATTTTCCACTGTCACCCTCCAGACCAGAAGATACCCAAGCCAAAGCGGTTGCAGGAGTGGTATAAGAAAATGCTTGATAAAGCTGTAGCAGAGCGCATTGTGCATGACTACAAGGACATCTTCAAACAGGCAACAGAGGATCGCCTTACCAGCGCCAAAGAATTGCCCTATTTTGAGGGTGATTTCTGGCCCAATGTGCTTGAAGAGAGTATCAAAGAACTAGAGCAAGAAGAGGAGGAAAGGAAGAGGGAGGAGAACAGCACATCCAATGAGAGTGTTGATacaaCAAAAGGTGACAGCAAAAATGCcaagaaaaagaacaacaagAAGACGAGCAAGAACAAGAGCAGTTTAAGCCGAGCCAACAAAAAGAAGCCGGGCATGCCAAATGTGTCCAATGACCTTTCACAGAAACTCTATGCCACAATGGAAAAGCACAAAGAGGTCTTCTTTGTTATACGACTGATTGCGGCACCCAATTCCAATTCTCTCCTGCCCATTGTTGATTCGGATCCTTTGATGGCGTGTGACTTGATGGATGGTCGTGATGCCTTCTTAACACTTGCACGGGATAAGCACCTGGAGTTTTCTTCAATGCGGCGCTCCAAATGGAGCACAATGTGCATGTTGGTGGAACTGCATAACCAGAGCCAGGACCGTTTTGTCTATACCTGCAATGAGTGCAAGCACCATGTTGAAACTCGCTTCCATTGCACTGTTTGTGAGGACTATGATCTCTGCATCACTTGCTATAATACAAAAGGTCATGAGCACAAGATGGAAAAACTGGGCTTGGGGTTGGATGACGAAAGCAACAACCAGactccttcctcaacacagaaTCCTGGAGATTCACGGCGTCTTAGTATTCAGAGGTGCATCCAGTCTCTGGTGCATGCCTGCCAGTGCCGCAATGCCAACTGCTCGCTTCCATCTTGCCAGAAAATGAAACGTGTAATTCAACATACCAAAGGCTGCAAGCGTAAAACCAATGGTGGTTGTCCTATCTGCAAGCAGCTCATCGCACTCTGTTGTTACCATGCAAAACACTGCCAAGAGAACAAGTGCCCTGTGCCATTCTGCCTCAACATCAAGCAGAAACTGCGGCAACAACAACTCCAGCACAGGCTACAGCAGGCCCAGATGGTGCGTAGAAGAATGGCCAGCATGCAGAGGACAGGCCAGCAGCTTCCAGGAGGCAATGGTGGACTGCCATCTCCTGGAAACAATAGTACTACTGGTCCGAGCACACCGACACCAAGCACTCAGCCCCCTACCCCACAGACGCCCACTCAACAATGTCAGACTCCAGTGACTCAACCTGGCATTGGAGGTGTTCAATCACAACAGCAGTTGGCAGGGATGCCCCATCAGTATCAGCAAATGACTGGAAGTGGTGGCATGATCAACTCCCCACAGCAGCCCCTCATcccacagcagcagcaacagccaACATCAGTTCAGCATCTTCAGCATGCCAACAACCTTCCTCCATACGTGCAAAGACCTCCAGGCTCCTCTCCACTTCCTCAGTCAATGGGAAAGCCAGGCATGGTGCCAGGAGGCTTCCCTCAACAGCAACAGTCCAACCTAGGGCAGAATGTGATGACTCAACATCAGCCACCTGGCCCCCCACCTGCTGCTGTAGAAATTGCCATGAAGATTCAGCGAGTTGCAGAAACTCAAAGGCAAATGGCTCAGCAAAAGATCTTGCAAAGAAATCAGCCTCCTGGAATGATGCCTCAACATCAGGGTCTTCATCAGGGTCCCCAGGCTCAAAACCAAATGGGCATGAACCTTCCTGGAGCTGCAATGGGAGGGCCTCAGGGAATGCCACCCCAGACACAAGCAGCAGTTGCCCGAACTCACATGGATCAACAGCAGGGAATGATTACAGCAGgcatgcagcagcagcagacagGACCTCAGGCTCAGCTCCCCCAAGTCCAGTTACAGCAGGGCCAGCAAGGAGCACCACAACAGCAATGGAATGGTCCCGGGATGCCTCCTCAGCAGCGACCTGGAGTTATGAACCAGATGGGTCTGCAAGGAATGGTTGCACCtcaacaacagcaacagcagcagccaGTTGGTCAGCAGCAGCAAGGGCTTTCTGGTGTAATGGGTATGCtgggccaaggaggggctgcaCCTGCAGGTACTGGCCCTGGAAATCACCCTCAGGCTGCCATACAGGACCTTCTAAGAACCTTAAGGTTACCTAGCTCTCCTCATCAACAACGGCAAGTCCTGAATATACTACGTTCTAACCCTCAGCTTATGGCAACCTTTATCAGGCAAAGGGTTCCTAGGTACCTTGGTCGAGGCGGGCCTGGAGCAGGAGGTACAGGTGTTCCAGGAGGACCGGGTGGAGGTCCAGGAATCATTGATGGCCAGCAAATGAATGTAAATCCTGGGACAAATCAAGGAGGTATGCATATGGCACAAGGAAATACAATGCCAATGAATCaacttcagcagcagcagcagcaacaacaacaacaacaacaacaacaacaacaacaacagcaacagcagcagcagcaacttCAACAGCGGTCAATGATGGGAGGGAATTTGCAGCAACAACAGCAACTGGCAGTattgcagcagcagcaacaacaacaacagcagcagcagcatcaagGTGTTATGCCCAATCAAGGTGCCAACATGTCTAACATCACCCCCCAGTTTAGAGAAATGATGAGGCGGCATttgcagcaacaacaacagcagcagcagcagcagcaacaacagcaacaacaacagcagcagcaacaacaacagcaacatatGGAAAACCATGCTCAGTTCCAGCATCCTCAACCACCCCAGCAGCAGGGTTATCTTGGGCAATCTGGACTGCCCCCACAGCAGTCTGGTCAACCTCAGCCTGGTGGTCTCCAGCAGCAACAGGGAGGTACCCAGCCTGGCCCCCAACAAAGCTACTCTGGGACTATGTCCCATCAGCAGGTTGCAGCAGCTCTGCAACAAAGGTTGCAACACCAGCAACTTCagatgcagcagcagcaacaacaacaacaacaacaacagcagcagcagggtGCTCTGGCAGGACTCCAGAGTGCTGATGGAGGTCCTGGAGGTGGTGGTCCCCTCCAGCAGCAACAGATGCAGTCTGCTTCAATTGGTTCCCAACCTCAAGTCATGCTTCAGCAAGCTTTGCAGCAGCGGCTCCTCCAGCAACAACAGTCACACTTAGGAGGAGGATCTCCTGCTCAACACAATCCCATGAGCCCTCAGCAGCCCCAGCAACAAATGTCCCAGTCTCCTCATTTGCAGGGCCAGCAGTTGCCCAATTCTCTAAGCAACCAAGTCCGCTCACCCCAGCAGTCGCCTCGGCCCCAGTCCCAGCCACCAAACTCTAGTCCATCTCCTCGCTTGCAGCCCCAGCCTTCACCTCATCGCATCTCGCCGCAGACCCAGATGGGCTCCCCTCACCCAGGTCATCTTCCTCAGCATCACGGTGGCATGGTTGCACCCCCACCTCCACAGCAACAGCTGCAGACATCTCAACAGCAGCAACAGGCTAATGCGATGGACCAGGGCCCATTTGGAGGAGACCAGAGTGCCATGCTTTCACAGCTAGGTGGGATGGGAGCCTTGCATGGGCAAGGGACAAATGACATGCTGACAAATAACCAAGATATGGGGTCGAATATGAATCACTCGTTAGATTTGATGTAATATTGCAGTGCTCAAACAACTGTCCTGATTGCCAGGGTTTGGTAGCAATCCTAGGATTTACAAAGGCTGTCATcgatagtattattattactattactattattattatttaatattttcttatgTAATTGAAAAGAACTGAACTTCCTATGGGAGATACTACATGTGCAAGTCAACAAATTAAGTTAAATGAATGGTAAGTTATTgctgttaatatataaatatatatataaatatattttttgccaaTTGTGTTCAAAGGGTTTTGGGTTATGGGATGGGAAATATTTCCTCTTGGTATATGACCAGAAATATTTTTGGGGTTAAGAAGTCTGCcttttttatagatattttttaagattttaaaagtggcatgaaattaaaaagcaaaatgcgTAAACAAAATGgactattttgttttctttttccttaaAGCAGTCAAGAATGTCATCAGTCTCGGAGAGTATTAGATTTTTTCTCAGCAGTGTAATGATTATGAAAATGATGGCATTGGTAAtaactgttatttattactCGGCTCTTTTGGTTGGCTAATAGATATTttcttgttcttttgttttggaCAGTGTATGGCATATGCTATTTGAACCTACAATTTTTGAAgagtatatttttgttattgatAGAACCTCACTATAAAAGGATGAATTTATATTCTTATTCtactttatttttccttttttaattttatttctctcCTTTTTTGTGAGGGGTGGATGGGgcttaaattaagttttgatagtGTTTGGGAAACGAGTATGTGTTTTCTGATGGCTTGTTGCATGGGAAATATTTGTCCTATGCATGTCGCAGTTTTCCCACCCTCATACACCTCTGTCCCATGAATGTGTTTTCACTATGCCCTTCTCTGTAATGGAACCTGCTGACACTACAGAGCAGGGAACTCTTGAGACAAAATGTTGATGCGGGATTTTGGATTTTGCAAATAATCACCTGGAACTACATCCCTGATTCCAAGTCCGTCTCTTTCCTCTCACGTGTCCCCAGCAAGGAATCTATCTGTCTCTACACACGCATCTCTAGTGTTCTGAACTTTTGGGATTTAAGTGATCTTCttaatgtataaacaaaaactgaaaataaattactgaAAATGA

Function

GO: NA

KEGG:

id description
K04498 EP300, CREBBP, KAT3; E1A/CREB-binding protein

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU128273 lncRNA upstream 20629 8682389 ~ 8686117 (+) True G86713
TU128123 lncRNA upstream 361778 8344669 ~ 8344968 (+) True G86593
TU128088 lncRNA upstream 414684 8291843 ~ 8292062 (+) True G86577
XR_006252254.1 lncRNA upstream 499998 8204145 ~ 8206748 (+) False LOC122355856
TU128340 lncRNA downstream 145623 8873327 ~ 8873545 (+) True G86756
TU128342 lncRNA downstream 147411 8875115 ~ 8875455 (+) True G86758
TU128592 lncRNA downstream 570566 9298270 ~ 9298849 (+) False pkd1b
TU128622 lncRNA downstream 753881 9481585 ~ 9485156 (+) False G86943
TU128623 lncRNA downstream 753881 9481585 ~ 9487179 (+) True G86943
XM_043254477.1 mRNA upstream 8245 8693412 ~ 8698501 (+) True chadlb
XM_043254273.1 mRNA upstream 13556 8687911 ~ 8693190 (+) True rangap1b
XM_043254243.1 mRNA upstream 38357 8654001 ~ 8668389 (+) True gucy2cb
XM_043254249.1 mRNA upstream 53966 8650331 ~ 8652780 (+) True csdc2a
XM_043253382.1 mRNA downstream 16557 8744261 ~ 8747079 (+) True desi1b
XM_043253348.1 mRNA downstream 27536 8755240 ~ 8780804 (+) True shisa8b
XM_043253350.1 mRNA downstream 28077 8755781 ~ 8780804 (+) False shisa8b
XM_043253357.1 mRNA downstream 94153 8821857 ~ 8827271 (+) True gna13a
XM_043253361.1 mRNA downstream 99873 8827577 ~ 8830821 (+) True LOC122355269
unassigned_transcript_1921 other upstream 1415 8705260 ~ 8705331 (+) True trnaq-cug_20
TU127672 other upstream 862663 7815823 ~ 7844083 (+) False LOC122355675
TU127500 other upstream 1398517 7307924 ~ 7308229 (+) True G86143
TU127497 other upstream 1401898 7303138 ~ 7304848 (+) False G86142
TU127344 other upstream 2184175 6521829 ~ 6522571 (+) True G86029
XR_006252198.1 other downstream 108744 8836448 ~ 8852449 (+) False arsg
TU128728 other downstream 1029569 9757273 ~ 9759461 (+) False LOC122355274
TU128819 other downstream 1143960 9871664 ~ 9873895 (+) False LOC122355252
TU128881 other downstream 1753911 10481615 ~ 10487341 (+) False LOC122355192
TU128882 other downstream 1759916 10487620 ~ 10491172 (+) False LOC122355192

Expression Profile