RNA id: XM_043253297.1


Basic Information

Item Value
RNA id XM_043253297.1
length 6671
RNA type mRNA
GC content 0.50
exon number 29
gene id neurl4
representative True

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 9576232 ~ 9594931 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AAATATACCCGGCCAATGGAGAGCTGCCCACAAGCGGTTCTCCGCTGTCGCAAAACGACGCTCGGTGTCGTGCACCGCGCCGCCCGTGCGAAGATGGCGGCTGAGCTGCATCCGCGCAGCGGAAAACTGATCGGTTTATCGAACTCCAACCGAACCGCTCAACGGAATCAGCCGGTACAGGAATTCAACCACGGCCTGGTCCTCAGTCGGGAGCCGCTGCGGGACCGCGATGTCTTCACTGTCCGCATCGACAAGAAGGTGAACTCGTGGAGCGGTTCTATAGAGATTGGAGTGACTGCGCTGGACCCAGCCGGCCTGGAATTTCCCAGCAGTGCCACGGGACTGAAAGGGGGCTCGTGGATTGTGTCCGGCTGCTCTGTGCTAAAGGACGGCCGCTCAGTCCTGGAGGAGTACGGTCGTGACCTTGACCAGCTAGGGGAAGGGGACCGTGTAGGGATCCAGCGGAATGGGAAAGGAGAGCTGCATCTGTGGGTGAACGGGCAGGACTGTGGCACGGCGGCAAGTGGACTTCCTTCCCGTTTATGGGCAGTGGTGGACCTCTATGGGAAGTGTACCCAAGTGACTGTCGTAAGCTGTGAACCCCCACCTGAAATGGAAGGGGAAGAGGATGAAGAGGTGGAGGATGAGATTGTGTCGACGCAAGCGGTGTCCATAATGGCGGATGCTTGCCGTAACCATGATGATAGGGCTGGAGCTATCATGCTGTCTGCAGCTGGTGCTACAACAGCCATGATGAATGGATCAGCAGAGGAAGTGCCTGAGGTGTCAAGGGCACACAGTCGGCCCGACAAATTTCCAAACAACTTTGAACCTGATAGTGTTTTAACCGAGCACCAGTTATTTGATGTGTTCAACAATGCCATTGTCTCTCTGTATCGTTCAGAGGATGAGGGTGGAGAGGACTTGGGGGTGGGTGGGGGAGGCTCTGACTCCTCGAGGGGTGGCACAGGAAGTAGTGGTGGAGGACgaggaacaggaagtgacagTGGCATTGGTGGTGGAGGGACAGGTGGAGGCAGTAGCAGCAATAGCAGCCCAGCGGGGAGCTCTGGTGGGGTGGCGGGACTGGGGGTGGCCGCTGGCGGCATGACAACCAATGATGCACTGCTGTTTCATGAGAAGTGTGGCACGCTGATCAAACTAAGCAACAACAATAAGACGGCAGAAAGGAGGAGACCACTGGATGAGTTCAATAATGGAGTCGTCATGACCAATCGACCACTCAGACACAACGAAATGTTTGAGATACGCATTGACAAACTGGTGGATAAATGGTCTGGTTCCATTGAAATTGGGGTGACAACCCACAACCCAAATAATCTTGACTACCCTGCAACAATGACCAATTTACGTTCAGgcacAATCATGATGAGTGGCTGTGGGATTTTAACCAATGGGAAGGGGACTCGTCGGGAATACTGTGAATTCAGCCTGGATGAACTCCAGGAAGGGGATCACATAGGGCTAATGAGGAAAGCCAGTGGAGCTCTGCACTTCTACATAAACGGCATTGACCAGGGGGTTGCAGCCAATCAGACCCCTGGAGTAGTGTATGGAGTGGTGGATCTCTATGGCATGGCGGTAAAGGTCACCATCGTCCACAACCATAACCACAGTGATCGTTTACGCCGCAACAATGCCATCATGAGGGCACTGTCACCTGACGTGGGCCGGCCTCGACCTGCTCTCTCATTGACCCCTGAGCCTGATGTTCCAGACCGCTTGCTCTTCCATCCAAACTGTGGGCAGAAGGCTGCAATCATCAGCGATGGCCGCACTGCTTTACGGCCTCATGCGACGGATGACTTCAATCATGGCGTCGTGCTTAGCAATCGTCCGCTGCACTCCAATGAGGTTTTCCAGGTGCGCATCGACAAAATGGTGGACAAATGGGCAGGTTCTATAGAGATTGGTGTGACTACTCATAATCCCGCCTATCTTCAGCTACCATCAACCATGACCAACCTGCGCTCAGGAACCTGGATGATGACTGGAAATGGTGTCATGCACAATGGAACTACAATTCTTGATGAATATGGGCACAACTTGGACCGTCTAAAAGCTGGAGATACAGTGGGAGTTGTCCGAAAGGAAGATGGGAGTTTGCATTTCTTTGTGAACGGAGTGCCTCAAGGCCCTGCAGCCTGGAATGTTCCGCCCAGTGTGTATGCCGTGGTGGACCTGTACGGACAGGCTGCCCAGGCCACCATCATGGATGATATGGCTGATCTCCCTCCCTTGCCTGATGACAGCTCTGAGGGCCCTACTGCCATGTCCCCTGGTAGCCCATGTTCAGTTTCGGGAGCTACAGCTGCCAACGACTTGCGTTTTCATCAGCTGCACGGCACAAACGCCGTCATCACCAACGGTGGCCGAACGGCTCTCAGGCAGAACTGCCGAAGCGAGTTTAACGACGCCATTGTTATTTCAAACagGTGCCTTCGGGATGGAGAGCTCTTTGAAATTGTAATTCAGAAAATGGTGGATCGTTGGTCAGGCTCAATAGAAGCAGGAGTAACCGCAATCAGACCAGAAGAATTGGAGTTCCCTAATACAATGACTGACATTGACTATGACACCTGGATGTTGAGTGGCACGGCGATCATGCAGGATGGGAATACCATGAGGAATAACTACGGCTGTGACTTGGACTCTTTGACCACAGGCTCCAGGATTGGGATGATGCGTACAGCTACCGGAGACCTGCATTACTTCATCAACGGCCTTGACCAGGGTGTAGCTTGTACCGGGCTGCCACCAGaagTGTATGCTGTGATCGATCTTTATGGTCAGTGTGTGCAAGTGTCCATTACAAGTTCATCGGGGCCACTGGATAATAGTCTGTGTACCAGTAACATCACAGAGAAGAGCTTCCCCATACACTCTCCAGTGGCAGGGGTTGCCCATCGCCTGCACAGCAAACATGGTAAGAACGTGGTGTTACTAGGAGACGGTTGTCAAGCGCTGAGGGTCGATGGATACGCCCATGGAATTGTGTTTAGTGCAAAGGAGCTCAAGACAGATGAGGTGTTTGAGGTGAAAATTAACAAGGTAGATGACAGATGGTCCGGTTCCCTTCACGTGGGTTTGACCACCCTGCAGCCCCCTGACCTACCATCCTGCCCTCTCAGCGGCCTCTCTCCTTCGCTTACCCAGctcaggtcaaaggtcacctgGGTCCTCGCCGGCTCAGAGGTCAGGCGGAACGGAGTGCTGCAGAGACAGAACTATGGCTGCTCTCTGGATCGGCTAACTGTGGGAAATCGTGTTGGGGTGAAGAGATGCAGTGATGATACCATGCACATCCTCATTGATGGAGAAGACATGGGACCAGCagccactgcagtggcgaagAACGTGTATGCTGTTTTGGACCTGTACGGAAAGGTGACCGCCTTGTCCATCGTCAGCTCCACGCTAGTCGAGGATTCAGAAAGTGTTAAAGCTCCGTCGCTTTCGCCCGACAGCTGCAGCGAGGGAGAGGAGGACAGCACTCCCGTCAGAGAGTGTGAAAACGAGCCTGCACTGGTGCCCACGGTCATGACTTTTTTGGAGAATCACGGAAAAAATATCCAGCTGTCCAATCAGAACCTGACCGCCGCCAGGGTGTCGAGCTACAACCAGGGTCTACTGGTCACAGCTCAGGCTTTGCCACGCCAGCAGCTCTTccagTTTCAGATAGACCGGCTAAATCCATCATGGACGTCCTCCCTGTCGCTGGGTGTGATTGGTCATTCGCCAGACCGCCTCAACTTCCCTTCCACAGCTTGCTGCCTTAAACGCTCCGTCTGGCTACTGCAACGAGACTCTGTTTTTCACAACTCTTTGAAGATTTGTGAGAACTATGGTCCTAACCTGGACACCTGTCCTGAAGGGACCATTTTGGGGCTGTTGGTGGACAGCAGTGGTTGCCTCCATCTGTTTGTTAACGGCATGGATCAGGGCGTAGCAGCCCAGGACATCCCAAGCCCTTGTTACCCCCTTATTGACCTTTATGGCCAGTGTGAACAGGTCACTATAGTGACAAATCACGTGTCTGTGGTTGGCGGGGAGAGAGGAGACATGCGTTGTCAAGGGGACATGGAGAAGGCTGATATGGTGGATGGTATAAAGGAGAGTGTCTGCTGGACGCCGCCTCCAGAGGTCAACCCCAATAAGACGTGCGAGTACCAGGCCCTATGTTCCAGATTCAAAGAACTGCTCACACTGCCTGATGGTTATTTTAATGAGGATGCAAAGTACAACCTATGTTACTGTGAGTCCTGTCACAAACTAAGGGGTGATGAGGCCTATTACAAGCGAGGGGAGCCTCCCAGAGACTACGCTCTGCCATTCGGCTGGTGCCGCTTCGCACTCCaGATCAAGACCCACTGTGAAGTCTCCAATGCCTTCAAGAAGTGGCATATTGCGTACCACGGCACTAGTGTAGGCTCACTTAGACGCATACTGGACCACAACCAACTCTTGTCAGAATCGTCCTCGATTTTCTCCTTGTCCCCGGTGAAGACGGAGGGTCACGGCAGCTACGGGGAGCCCGAGGAGAACAGCGCCCCGGAGCGAGAGATTCCCCGCGTGCAGCTTTCTCCAACCATGCGCTACTCTGGCCTGGAGGTCTTCGCCCCCAAAGTGCAATTTCGAGACCCGCGTTCCCTCCGCTGTCACCAGGCCCAGGTGGGCTTCCAGGTGTGCGTGCGGCCGGGCTCCTACAAAGTGGGCCCGACCTCGCTGGGTATCAGCGAGCCCCTCGATCCTCGATTCAGCAATGCAGAAATCGAATGGATCACCAAGGAAAAGGGAGGCACGCTTCTGTACGGCCTGCTCATACGGGTGGAGTAAAAACAGACTCGAGCGAGGATATCGGCATCATCTTCCTCGCTATAAACCAAATTTCAGCGCAGCCCCCCCCTCAGGCGTTGAGGACGAAGAATCGTTTCGCTGCACCAAACTCACTCATCTCTGCATGTTTCAGACatacttttgtgtttgttttgttttgaaggaGGGTGATGATAATCCCCAGAGACAAAGACACTGCCTGCACTTTATGTTTCGGACACTGGTGGGCGATTTTTAGTCTTTCTCATTAAATTAACTGACTGCAGGctctacgttttttttttttcttttcggtCTCATACATCTAAAGCTATATATCACCCTGTCAGTTTTTGCTTTGAGAGCCTGTTtttcacactgaaataaaactggACCGAAGCAACGCTAAACCACCAATTCATAGCACAACCCTGGATTTATACTCATGTTTTTCTTAAGACTTGCAACGGACAAATCAACCTGGAAATAACCAAGACCTGGTTCAACGACAACGTCAACACGATAAAGGATGCAGCAAAATCACCTTATCAGgaagaaaatgttatttcatcGCTTTCCGTGTTTACTTATGTTCCAGATTCTCCTCTATATTTGGTTTTTATagctgtgtatttattaacaaattacAGCAAACAGTGTTTAGTCAAATGCAAAGTAAAAATGGCTACATAAAGACAGGAaggcaagatttttttttttttgtgaatacacgtgtatatatataaccatttaTGGAGTACCAACTAAAATCACTTCATAGGACCCAAATTGTGACATAGTTTAACTGGATGAATACAAACATTTCGCCCCATTCCCCACCCCAAAGCACTCTAAAATATCTGAAGAAAAGAGTTTAAGaagctgtatgtgtgtttgtgtgtccgtTTTGGCCAGATGTGCATCTCGATAGTCTTTACATCATTCGCTGCCCATTGTTTAAGGCCAGTCACCTGTGGAAGTCCTTGTCTTATGTTTAAAATGCTTCACTGCTTTAGATGTTGTTTACACATGGGTTACGTTCGGAGTTCGTCTTTTGTTCGTTTGCTGTTGAGCCCATTTGTTTACTCACAAACGTTAGCGTAAGAACCGGGATGCGAGTGTTTCTGAAATTAATAGTGGCAGGTAGAAAAACTCGATGGCAAGCTCTGTTTATGTTCTGCGTTTAACATCCTGTTCAACAATAAGGActgtttattcagtttattcGTACATCAGGTAGATGCGTCTAGACTCATGAGGAATTTTGGGAGATAAAGACGTCTACTGGTATACCTGACCCCAGAGTTGGTGTTTACACTGGGAATGTGATTTGttcataattaattgtttacTCCATGCTAGTTATATTGCCATGTTTTTTGTATCCTCTTTTGACTAAGATTGCACAAATGTAAGCCCTTGCTGGAAAAacgttgacaaaaaaaaataaaatctactcTTTTGATTGTATCTAGACTTACAGTACCCTCTGTGAAGGCATATCTCTATccatttagggtttttttttttctttctttttttaattttgttgccAATATGACATACTTGAGTACATTTTGCATTAGCAATCCCGCTTTATTGCCAAGGGCGATGTCTGAATGAATGCTTGCTATGTAAatcagaaaatgtgaaaacacaGGGTTCGTGTCGGCCCATTGCTGCTTTTCAgttgtttgtattatttgtttatctttgtgttatttttatgtctttatgaTGTGTTGTACAGCCTGTTACATAACACTAACATTACCTTCCTGGtttgtaagaaaataaaaatccaaaaaagagACAGTTATGCACAACATGGAAAA

Function

GO: NA

KEGG:

id description
K16777 NEURL4; neuralized-like protein 4

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU128749 lncRNA downstream 1707 9573634 ~ 9574525 (-) True G87019
TU128629 lncRNA downstream 86942 9481630 ~ 9489290 (-) True ormdl3
TU128616 lncRNA downstream 262534 9311671 ~ 9313698 (-) False thrab
TU128617 lncRNA downstream 262704 9311701 ~ 9313528 (-) False thrab
TU128593 lncRNA downstream 276333 9299679 ~ 9299899 (-) True G86916
TU128768 lncRNA upstream 37113 9632044 ~ 9635117 (-) True G87034
TU128795 lncRNA upstream 168171 9763102 ~ 9767238 (-) True G87055
TU128838 lncRNA upstream 325256 9920187 ~ 9939849 (-) False thrab
TU128874 lncRNA upstream 765946 10360877 ~ 10361414 (-) True G87104
TU128879 lncRNA upstream 814408 10409339 ~ 10444778 (-) False LOC122355705
XM_043253314.1 mRNA downstream 17326 9545267 ~ 9558906 (-) True arhgef15b
XM_043253315.1 mRNA downstream 18539 9545267 ~ 9557693 (-) False arhgef15b
XM_043253318.1 mRNA downstream 32404 9524286 ~ 9543828 (-) False nsfb
XM_043253317.1 mRNA downstream 32404 9524286 ~ 9543828 (-) False nsfb
XM_043253316.1 mRNA downstream 32404 9524286 ~ 9543828 (-) True nsfb
XM_043253356.1 mRNA upstream 1364 9596295 ~ 9600672 (-) True shbg
XM_043253298.1 mRNA upstream 6580 9601511 ~ 9615541 (-) True zbtb4
XM_043253343.1 mRNA upstream 67827 9662758 ~ 9671280 (-) True zcchc4
XM_043253312.1 mRNA upstream 118133 9713064 ~ 9734340 (-) True LOC122355243
XM_043253313.1 mRNA upstream 118133 9713064 ~ 9728397 (-) False LOC122355243
XR_006252200.1 other downstream 86920 9484946 ~ 9489312 (-) False ormdl3
XR_006252199.1 other downstream 86920 9484946 ~ 9489312 (-) False ormdl3
TU128628 other downstream 86942 9481559 ~ 9489290 (-) False ormdl3
TU128627 other downstream 86942 9481630 ~ 9489290 (-) False ormdl3
TU128530 other downstream 698120 8875617 ~ 8878112 (-) True LOC122355288
TU129388 other upstream 1447957 11042888 ~ 11045882 (-) True LOC122355648
TU129464 other upstream 1726492 11321423 ~ 11322603 (-) True G87489
TU129586 other upstream 2237948 11832879 ~ 11835612 (-) True G87569
TU129639 other upstream 2354340 11949271 ~ 11951155 (-) False G87608
TU129915 other upstream 3054452 12649383 ~ 12675472 (-) False prr15lb

Expression Profile