RNA id: XR_006252198.1


Basic Information

Item Value
RNA id XR_006252198.1
length 1828
RNA type transcript
GC content 0.49
exon number 14
gene id arsg
representative False

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 8836448 ~ 8852449 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCTGCGTCATGATGGGGGCGGAGGGACGCGAGTGTCAACAAACTGATGAACAGAACAACGACCGAAATCTTTTCATTGATTGAAATCATCGCTCGGCATTAGattCAGCATAAAATGGCACAGTTTGGATTATGTTTACTGCTTCTGTTCTCTGGACTGATTCCTCACATCAAAAGCCACATTAAAAAGCAAGACGGAAATAGTGAAAAGGAACGGCCCAATTTCATCATTATCCTTGCTGATGACATCGGATGGGGTGACCTCTGGGTGAACAGGCCTGACAACTCCACACCAACACCCTGGCTGGACTCATTAATGCTGATGGGCAAAAGATTCACAGACTTCCACTCTCCTGCCTCCACATGCTCTCCGTCACGTGCTGCCCTCCTGACAGGCAGACATGGGCTACGCAATGGGGTCACTCATAACTTTGCAGTGGGATCTGTAGGAGGGCTGCCACTCAATGAGACAACATTTGCTGAGCTCCTGCGTGATGCAGGTTATTATACAGCCATTATCGgAAAATGGCACCTTGGACACAATGGTTCCTACAATCCCGTTCATAGAGGTTTTGACTATTACTTCGGTGTTCCTTATAGTAATGACATGGGCTGCACTGACAAACCAGGTCTCGACCTTCCTAGCTGTCCTCCCTGTCTTAACAGTCAGTATACTACTAGGAAGCATGAACAATGCTACACTAAAGTGGCATTGCCTCTATTTGAAAATGAGACAATAATTGAACAACCCTTGGACACATGGAGCCTTAAAGACAGATATGCCACAGCAGCTGTCAATCAGATATTCACAGCCAGCATTTGGAAAAAGCAGCCGTTCCTGCTGTATGTGGCTCTTGCTCACATGCATGTCCCACTGTTTCACAACGCTTTCCTGAACATCACGACACAAGACGCTTACACGGCTAGCCTCAGTGACATGGACTCTTTGGTGGGCACAATCATGAAAGCGGTCAGCACAGAGCAGCTGGAAAACACATTGATATGGTTCACTGGTGACAATGGTCCGTGGGAGCAGAAATGCCAGTTTGCTGGGAATGTTGGGCCTTTTGTTGGAGAATGGCAGACGAGCAGAGGTGGCGGCTCAGCCAAGAGAACCACATGGGAAGGAGGTCATAGAGTTCCCACAGTGGTCGCATGGCCTAAGAAGATCAAACCCAACAGCACCAGCAGCGCCCTGCTGAGTGGTCTGGATATCTTTCCAACTATTCTCTCCCTGGCTGGTGTAAAACCACCAGCAGATCGACGCTATGATGGCATTGATATGACTGACATTCTGCTCAACGACTCTGATTCAGGCCATAAGAGTCTCATGCACCCTAACAGTGGTGCTGCAGGACGGTTCGGTGACCTTCAAACTGTCAGGCTGAAACATCACAAGGCATTTTACATCACAGGTGGATCAGTGACATGCGGTGGAGGAAGTGGACAGCAGCAGTATCACGACCCCCCTCTGATTTTTGACCTCTCACTGGACGAGGCAGAGGAGAACCCTCTGGACCCTGAGAGCGAGGAATACAGATCTGTCCTGAAGGacgtggagagagagagggaggctCTGTTATGGGACATCGCCACAGATAAGGTATCCTCTGTCGACTACAACGTGAATCCGTCTGCAGTCCCCTGCTGCCAGCCACACAACCCCGCCTGCCGCTGTCACAGTTTAAAATGAGGTGGGGATGTCATATGGAGCTGCAGAGACACACGGGGACAATGAGACATCGGTTTGATAGCTGATAGCTGATTCGAGCTTGCATACTAGCTGAAATGGAAGACACAGAAGTTCGACAACAGAAACTGGACAATCA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008484 sulfuric ester hydrolase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU128273 lncRNA upstream 150331 8682389 ~ 8686117 (+) True G86713
TU128123 lncRNA upstream 491480 8344669 ~ 8344968 (+) True G86593
TU128088 lncRNA upstream 544386 8291843 ~ 8292062 (+) True G86577
XR_006252254.1 lncRNA upstream 629700 8204145 ~ 8206748 (+) False LOC122355856
TU128340 lncRNA downstream 20878 8873327 ~ 8873545 (+) True G86756
TU128342 lncRNA downstream 22666 8875115 ~ 8875455 (+) True G86758
TU128592 lncRNA downstream 445821 9298270 ~ 9298849 (+) False pkd1b
TU128622 lncRNA downstream 629136 9481585 ~ 9485156 (+) False G86943
TU128623 lncRNA downstream 629136 9481585 ~ 9487179 (+) True G86943
XM_043253361.1 mRNA upstream 5627 8827577 ~ 8830821 (+) True LOC122355269
XM_043253360.1 mRNA upstream 5627 8827577 ~ 8830821 (+) False LOC122355269
XM_043253362.1 mRNA upstream 5627 8827577 ~ 8830821 (+) False LOC122355269
XM_043253357.1 mRNA upstream 9177 8821857 ~ 8827271 (+) True gna13a
XM_043253348.1 mRNA upstream 55644 8755240 ~ 8780804 (+) True shisa8b
XM_043253368.1 mRNA downstream 3884 8856333 ~ 8862420 (+) True stx4
XM_043253330.1 mRNA downstream 10871 8863320 ~ 8869790 (+) True calcoco2
XM_043253378.1 mRNA downstream 26921 8879370 ~ 8884634 (+) True LOC122355280
XM_043253355.1 mRNA downstream 32331 8884780 ~ 8890206 (+) True st6galnac1.1
XM_043254354.1 mRNA downstream 38656 8891105 ~ 8895681 (+) True st6galnac1.2
unassigned_transcript_1921 other upstream 131117 8705260 ~ 8705331 (+) True trnaq-cug_20
TU127672 other upstream 992365 7815823 ~ 7844083 (+) False LOC122355675
TU127500 other upstream 1528219 7307924 ~ 7308229 (+) True G86143
TU127497 other upstream 1531600 7303138 ~ 7304848 (+) False G86142
TU127344 other upstream 2313877 6521829 ~ 6522571 (+) True G86029
TU128728 other downstream 904824 9757273 ~ 9759461 (+) False LOC122355274
TU128819 other downstream 1019215 9871664 ~ 9873895 (+) False LOC122355252
TU128881 other downstream 1629166 10481615 ~ 10487341 (+) False LOC122355192
TU128882 other downstream 1635171 10487620 ~ 10491172 (+) False LOC122355192
XR_006252209.1 other downstream 1689780 10542229 ~ 10581755 (+) False svila

Expression Profile